| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1851 |
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| Symbol | |
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| ID | 6877835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 1831262 |
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| End bp | 1833073 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642789720 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_002220279 |
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| Protein GI | 198283958 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.484605 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGATCC TCCCTACCCA GCAGCCAGTG GAAATCCTCC GCCACACCTT TGGTTACGAC
GCCTTCCGGG TGCCTCAGGA GGAGGTAATC CAGACCCTCT TGGCAGCCCG GGATGCGCTG
GTGCTCATGC CTACCGGGGG CGGGAAATCC CTGTGCTATC AGATTCCCGC CATCGCCATG
GCAGGGACGG GCGTAGTCAT TTCACCACTG ATCGCGCTCA TGGAAGATCA GGTCAACGCC
CTGCGTCAGG CGGGTGTCGC TGCCGCTGCC CTGAATTCCA GTGCCAGCCC CGCAGAATCA
CGCGCTACCG AGGAGGCGTT GCTGCAGGGC TGCCTCGATC TGCTCTACAT CGCTCCGGAA
CGCTTGCTGC AGGAACGCAC CCTCAATCTG CTGCAAAGGG CCACAGTCAA TCTCTTCGCT
ATTGACGAAG CCCATTGCGT GTCCCAGTGG GGTCACGACT TCCGCCCGGA ATACCTGCAA
TTACGAGTGC TGCATGAGCG CTTTCCGCTG GTGCCGCGCA TTGCCCTCAC GGCCACCGCC
GACTCAAAAA CCCGCGCGGA AATCACCGAA CGGCTGACGC TACAGGAAGC CGCCGTCTTT
ATCCGCTCCT TTGACCGACC CAACATCCGT TACCATATCA ATAGCGGTAG TCAGGGCGCA
CGCAACGCCT TGCTGCGATT CATCCGCGAC CGCCACGCCG GAGATGCCGG CATCGTATAT
TGCCTGTCCC GCAAGCGCGT GGAAGAAGTT GCCGAGTGGC TGCAGGGCGA AGGGCTGGAC
GCCCTGCCCT ATCATGCCGG TTTGGGTATC GATGAGCGGC GTCGTAACCA GCAACGATTT
CAGCAGGATG AAGGGGTGAT CATTGTCGCC ACCATAGCCT TCGGTATGGG CATCGACAAA
CCGAATGTCC GCTTTGTAGC GCACCTGAAT CTGCCCAAGA GCATCGAGGC CTACTATCAG
GAAACTGGAC GCGCCGGGCG CGACGGCCTG CCTGCAGAAG CCTGGATGCA TTACAGTCTT
CGTGATGTCG TGCAATTACG GCAGATGATC CAGCAATCCG AAGCCGACCT GCCGCGCAAA
CAGATGGAAG GACACAAGCT GGATGCTATG CTCGCGCTTT GCGAAACCAC GGACTGCCGC
CGTCAGACCC TGCTCGGCTA CTTTGGCGAA AGCCTCTCCT CCCCCTGCGG CAATTGCGAC
AATTGCCTGC AGCCGCCGGC CACCTGGGAT GCCACGGTGG CCGCACAGAA AGCCCTGTCT
GCCATCCATC GCACCGGCCA GCGCTTCGGG GTACAGTATC TGGTAGACGT ATTGCTGGCT
CGGGAAGATC CACGCATTCA GCAACAGGGG CATGACCGGC TCAGCGTGTA CGGCATTGGC
AAAGAACTGT CTGCCAACGC GTGGCGCGCC CTGTTTCGCC ACCTCTTGCT GCGCGGACTC
GTGGAAGTGG ATCACGACGG CCACGGTGGC ATGCGCCTCA GCCCATCCAG TCGCCCGCTC
CTGCGCAACG AAGAAAAGCT GACCCTGCGC CAGCACGAAA GCCCGGTCCC CAGGCAACGC
GAACAACGCC CGGAGATCGC ACCCCGCGAC ACCGCGCTCT GGGAAGCCCT GCGCCAGCAC
CGCCGTGAAC TGGCGCAGGC CCAGGGCGTG CCGCCCTACG TCATTTTTCA CGACGCCACC
CTCATGGAAA TGCTCCATCG ACGCCCGCGT GACCTGGAAG CACTGGCTGC GCTCCCCGGC
ATCGGCGAGC GCAAACTGGC GGCTTACGGT ACATCTTTTC TGAAGATACT GCATCGCGAT
CGGCCTTCCT GA
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| Protein sequence | MPILPTQQPV EILRHTFGYD AFRVPQEEVI QTLLAARDAL VLMPTGGGKS LCYQIPAIAM
AGTGVVISPL IALMEDQVNA LRQAGVAAAA LNSSASPAES RATEEALLQG CLDLLYIAPE
RLLQERTLNL LQRATVNLFA IDEAHCVSQW GHDFRPEYLQ LRVLHERFPL VPRIALTATA
DSKTRAEITE RLTLQEAAVF IRSFDRPNIR YHINSGSQGA RNALLRFIRD RHAGDAGIVY
CLSRKRVEEV AEWLQGEGLD ALPYHAGLGI DERRRNQQRF QQDEGVIIVA TIAFGMGIDK
PNVRFVAHLN LPKSIEAYYQ ETGRAGRDGL PAEAWMHYSL RDVVQLRQMI QQSEADLPRK
QMEGHKLDAM LALCETTDCR RQTLLGYFGE SLSSPCGNCD NCLQPPATWD ATVAAQKALS
AIHRTGQRFG VQYLVDVLLA REDPRIQQQG HDRLSVYGIG KELSANAWRA LFRHLLLRGL
VEVDHDGHGG MRLSPSSRPL LRNEEKLTLR QHESPVPRQR EQRPEIAPRD TALWEALRQH
RRELAQAQGV PPYVIFHDAT LMEMLHRRPR DLEALAALPG IGERKLAAYG TSFLKILHRD
RPS
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