Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1845 |
Symbol | |
ID | 6877829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 1825372 |
End bp | 1827360 |
Gene Length | 1989 bp |
Protein Length | 662 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642789714 |
Product | UvrD/REP helicase |
Protein accession | YP_002220273 |
Protein GI | 198283952 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | [TIGR01074] ATP-dependent DNA helicase Rep |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACACCCA TGGCTGAGCT CAATCCGCCA CAGCAGGAAG CCGTAACACA CATCCACGGT CCCCTGCTGG TGCTGGCCGG GGCCGGGTCG GGCAAGACCC GGGTCATCAC CCGGAAAATC GTCCATCTCA TCCGGGAGCA ACAGGTCGCA CCCAGGCATA TCTGCGCGGT GACCTTCACC AACAAGGCCG CCCGTGAAAT GAAGAGCCGC GTCGGGGAGG CCTTGCAGGG CCATAGCAGC CGCGGCCTGA TGGTCTCCAC CTTTCATCAT CTGGGCCTGC AGATCCTGCG TAAAGACATC GAGCGCCTGG GTTATCGCGG CAACTTCAGC GTCATTGACC CCGGCGATAG CCTGGGGATG GTGCGTAATC TGCTCCGCGA GGCCAATGGC CCCAGCGATC TCGCCGAAGC CATCCAGTCC CGCATCTCCC GCTTCAAGAA TGACGGCATC TTTCCCGAGG AGGCACGTGC CGACGACCGT CTCGGCCAGG AGGCTGCCCA TATCTATACG ACCTATCAGC GTTCCCTCAG CGCCTGCAAC GCCGTGGATC TGGATGACCT CATCCTCTTG CCCATCCGTC TGCTACAGGA CGATGCGGAG GCCCGTTATG CCTGGCAGGA CCGTATCCGC TACCTGCTGG TGGATGAATA TCAGGACAGC AACGGCGCAC AGTACCGGCT GATAAAAAGC CTGCTGGGCA CCCGCCACAA CCTGACCGCA GTGGGAGACG ACGACCAGAG CATCTACTCC TGGCGGGGTG CGGCTGCCGA CAACCTGGAT CGGCTGGCGC AAGATTTCCC CAACCTCAAG GTGGTCAAAC TGGAGCAGAA CTATCGTTCC ACCGGCCGCA TTCTCCAGGC CGCCAATACG GTCATCGCGC AAAATCCCCA CTTCTTCGAA AAACGCCTGT GGAGCACCCT GGGCGATGGC CACAGCATCC GCGCCCTGCG CTGCGCCAAC GAGACGGACG AGGCGGAGCA AGTGGTCAAT GCCATTCTCC GCGACCGCTT TCAGCGGCAG GGTGAATACC GCGATTACGC CATACTGTAC CGCAGCAACC ATCAGGCCCG TCCCTTTGAA ACGGCCCTGC GCAATGCCCG GATTCCATAC CAGATATCCG GCGGGATCTC GTTCTTTGAA CGCAGTGAAA TCAAGGATTT TCTGTCCTAT CTGCGGCTAC TGGTCAATCC CGATGATGAT CCCGCCTTTT TGCGGGCGGT CAACACGCCA CGCCGGAGCA TCGGCAGCAG CACCCTGGAA CGCCTGGGTG CCTTCGCCAA GGAGCGTAAT CTCTCGCTCT TCGCCGCACT TTGGGACGAT GCGCTGGATG TTCCCGACAA GGCGCGCATC GCCCTGCACG GCTTCGCCGG CTGGGTGAAT CTCAAAACGG ACGAAATCGG CAAGACCGAG CTCATCCCCG CCCTACAGAG TCTGCCGGAA GAAATCGGCT ACCTGCAATA TCTGCAGAAT GAAGGAGATG AAAAAGACGC CGCGCGCCGC TGGGAGAATA TTCAGGAGCT TTTGAACTGG ATGCAACGCC TGCAGGAACA GGATGAAGGC CCGCAAACCC TTGCGGAGAT CCTCAACCGC CTGATGCTCT TCCATGTGCT GGAGCGTGAG GAGGATGACG ATCGCGATGT GTTGCGCCTG TCCACCCTGC ACGCGGCCAA GGGTCTGGAG TTCCCCCAGG TGTTTCTGGT TGGCGCGGAG GAGGAACTGC TGCCCCACCG CAACAGCGAA ACCCTGGAGC AGATTCAGGA AGAACGCCGC CTCTTTTACG TGGGCATGAC CCGCGCCCGC TTCCGCCTGA CCCTCAGCCT TTGCCGTAAA CGTCGCCGCT ACGGCCAGGA TGTCCATCCG GAACCCTCCC GCTTCCTCCA GGAAATCCCC AAAGAACATC TGGACTGGCA GGGCGACCAG AACCCAGAAG AAGAAATGGA CCCCACCGCC GCTTTCGCCC ATCTGCGGGC GATGCTCGGC AAGACCTGA
|
Protein sequence | MTPMAELNPP QQEAVTHIHG PLLVLAGAGS GKTRVITRKI VHLIREQQVA PRHICAVTFT NKAAREMKSR VGEALQGHSS RGLMVSTFHH LGLQILRKDI ERLGYRGNFS VIDPGDSLGM VRNLLREANG PSDLAEAIQS RISRFKNDGI FPEEARADDR LGQEAAHIYT TYQRSLSACN AVDLDDLILL PIRLLQDDAE ARYAWQDRIR YLLVDEYQDS NGAQYRLIKS LLGTRHNLTA VGDDDQSIYS WRGAAADNLD RLAQDFPNLK VVKLEQNYRS TGRILQAANT VIAQNPHFFE KRLWSTLGDG HSIRALRCAN ETDEAEQVVN AILRDRFQRQ GEYRDYAILY RSNHQARPFE TALRNARIPY QISGGISFFE RSEIKDFLSY LRLLVNPDDD PAFLRAVNTP RRSIGSSTLE RLGAFAKERN LSLFAALWDD ALDVPDKARI ALHGFAGWVN LKTDEIGKTE LIPALQSLPE EIGYLQYLQN EGDEKDAARR WENIQELLNW MQRLQEQDEG PQTLAEILNR LMLFHVLERE EDDDRDVLRL STLHAAKGLE FPQVFLVGAE EELLPHRNSE TLEQIQEERR LFYVGMTRAR FRLTLSLCRK RRRYGQDVHP EPSRFLQEIP KEHLDWQGDQ NPEEEMDPTA AFAHLRAMLG KT
|
| |