Gene Lferr_1841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1841 
Symbol 
ID6877825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1821873 
End bp1822304 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content61% 
IMG OID642789710 
ProductUspA domain protein 
Protein accessionYP_002220269 
Protein GI198283948 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCAGA AGATTCTGGT GGCTTATGAC GGCAGCCCAT CGAGCGAGGT AGCGCTCGGT 
CAGGGCGCGG AACTCGCGCG TCTGGGGCGA AGTGAACTGC ATCTCTTCGG CGTCATCGTC
AGTACCGGCG GCATGGCCAT TGGTCAGGCG GCGGGGGCGG AGGATGTGTT GGGGCGAGAA
GGCAATGCCA TCCGCAGCAG TCTGGATGCC GTCGCGGGTA CGCTCCATGC AGAAGGCCTG
AGGGTGGTGA CGCAAACGGC TGAGGGCAGC CCTGCTGAAG AGATTGCCCG TTACGCATTG
CAAACGGGTG CCGACCTGCT GGTCATCGGG CATATTCCGC ATTTTTCCTT GGGACACTGG
CTGCAGGGGT CGGTCGCCAA AGCGCTGCTG CGAGAGTTGC CTTGCAGCAT TCTGGTAGCA
AAAGAGCGCT GA
 
Protein sequence
MFQKILVAYD GSPSSEVALG QGAELARLGR SELHLFGVIV STGGMAIGQA AGAEDVLGRE 
GNAIRSSLDA VAGTLHAEGL RVVTQTAEGS PAEEIARYAL QTGADLLVIG HIPHFSLGHW
LQGSVAKALL RELPCSILVA KER