| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1832 |
|---|
| Symbol | |
|---|
| ID | 6877816 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 1813377 |
|---|
| End bp | 1813820 |
|---|
| Gene Length | 444 bp |
|---|
| Protein Length | 147 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642789701 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_002220260 |
|---|
| Protein GI | 198283939 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1051] ADP-ribose pyrophosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.315644 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCTGGA CACCCCATGT GACGGTAGCC GCCGTCGCAG AGGAGAACGG CCGTTTCCTG
TTGGTGGAAG AGGTGGTAGA TGGGCGGCGC TGTTTCAACC AGCCTGCCGG CCACTGGGAT
CCTGGTGAAA CGCTGCTGGA GGCGGTTACC CGTGAAACCC TGGAGGAAAC CGGCCACTTC
TTCCGGCCGG AATATCTGAC CGGTATTTAT CACTGGGAAT ATCCTGCGAA AAACCTGACT
TACCTGCGCT TCGCCTTCGG CGGACACCTC GGCACCAGGG ACACGAGCCG CGCGCTGGAT
GCGGGCATCA TCGGTCCGGT ATGGCTGACC CCGGAGGAGA TGGCGGCGCG CGAGGGAGAG
ATGCGCAGCG TCATGGTCCA GCGCTGCATG GCGGATTATC GGGCGGGCCA ACGCTATCCG
CTGGAACTGC TGCACATGGT CTGA
|
|---|
| Protein sequence | MIWTPHVTVA AVAEENGRFL LVEEVVDGRR CFNQPAGHWD PGETLLEAVT RETLEETGHF
FRPEYLTGIY HWEYPAKNLT YLRFAFGGHL GTRDTSRALD AGIIGPVWLT PEEMAAREGE
MRSVMVQRCM ADYRAGQRYP LELLHMV
|
|---|
| |