| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1827 |
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| Symbol | |
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| ID | 6877811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 1807632 |
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| End bp | 1809122 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642789696 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_002220255 |
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| Protein GI | 198283934 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.115006 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTCGG CGATATTGAA CGTTTTGCGC TTGCCCCTGA TTCGCGGACC TACCCCAAAG
GGGTTTTCTT CCTGCATCGC ATTGTTCCTG GTTTTGTGTC TGTCCTGGTC GGATCCGGGG
TTGGCCACAG ATTTCCTGTA TCCGGCACAT GGTTTTTTTT CTGACCCCTG GGGCACAGGG
GAAGGGTTGC CAGCCCTCGG CGCTTACACC ACCGGGCGTC ACGGACTCCC CGAACCAGCC
TTGCCGGGAA CCCCGGGATC GAAAATACTC GCGCATTTGC GCTCCTTGCC CGCACTCACC
AACTGGGCTC TGCTGCACAA CCCGCAAACC GCTTCGGCTT GGGCCGGTCT GGGGGCACAA
GCGGCCGCCC TGGGTATCGC CAAAGGACTG TGGCTACCGA CCGTGAGTGT CGGGATCGGC
GGCCAGCGCA GCGGCGACAT ACTGAGCCGT GGCTTCAGCC CGCCGCTCGC CAACACCATG
AACGCTACGC TTAGCCTCAA CGAAGTGTTG TATGACTTCG GGCAACGCGC CGCCGCTATC
AGCAAAGCAG AATCGGCTGT ACTCATCGCA CGCTACGAGG CCAACGCCGC AATCCAGCAG
GTGGCCCTCA CGGTTGCCAA CGCCTACTAC GCCCTCGCTG GAGCGGAAGC CCGAGTGCGC
GTATACCGCC AAGGCGTAAA GGAGGCGCAA ACCATCTACG CAGACACGCG CCTGCAATAC
CGCGCGCATC TCAAGCCCAT CACGGATATG TACCAAGCCC AGACGGAACG GTCTCAGGCA
CGGGAGCAGT TGGTCATCGC GCAGGGTACC GAGCAATCCG ACCGGGGTGC GCTGGCCCAA
GCTGCAGGTT TGCCGGTGGC CATGCACCTT CCCATCGGTA CGTTACAATC GCCGCGGCAA
AGATTGTCCA TCGGCATCCG TCGCTGGTTA CGGTCCGCGG TCAGGAAAAA TCCTTCCATA
CTCAGCGATC TCGCCACAAT CCGGGAAGCG CGCGAAGCCA TTTTCCAGGC GGAGGCGCAA
GGGCTGCCCT CCATTTCCCT GGTGGGAAAC CTCGGGCAGA ATCAGTATCA AAGCCAGCAA
CCCAACGTGA AAATCTACAG CGTTGGATTA CAACTCAATA TCCCTTTCGA TACCAACTTT
ACTACCGAAT ACCAAGTAAA GGAGGATCGT GCGCTCTATC GCCAAGCGCA TGCGCAGGCC
CGGCAGGAAA CGGACACGAT CCTGCTGGAG GTCTGGCAGG CTTATGCCGG GCTGAAAAGC
GCCATGGGCG CCTACGTGAA CGCGCAGCAG CAGGTAATCA GCGCGAAAAA CGCCCTGTCC
GGCATCCGCA CCGAATATCG TATCGGCCTG GCGAACATCT TGGAGTTAAT CACGGCGGAG
CAGAATCTTA TTCAGGCACG CACCACCCGT GCGTCGGAAC TCGCCAATTA TTACGAATAT
CAGGCGGACC TATACAGATA CGCGGGACTG ATACCGGATC GCAGTCGATA A
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| Protein sequence | MRSAILNVLR LPLIRGPTPK GFSSCIALFL VLCLSWSDPG LATDFLYPAH GFFSDPWGTG
EGLPALGAYT TGRHGLPEPA LPGTPGSKIL AHLRSLPALT NWALLHNPQT ASAWAGLGAQ
AAALGIAKGL WLPTVSVGIG GQRSGDILSR GFSPPLANTM NATLSLNEVL YDFGQRAAAI
SKAESAVLIA RYEANAAIQQ VALTVANAYY ALAGAEARVR VYRQGVKEAQ TIYADTRLQY
RAHLKPITDM YQAQTERSQA REQLVIAQGT EQSDRGALAQ AAGLPVAMHL PIGTLQSPRQ
RLSIGIRRWL RSAVRKNPSI LSDLATIREA REAIFQAEAQ GLPSISLVGN LGQNQYQSQQ
PNVKIYSVGL QLNIPFDTNF TTEYQVKEDR ALYRQAHAQA RQETDTILLE VWQAYAGLKS
AMGAYVNAQQ QVISAKNALS GIRTEYRIGL ANILELITAE QNLIQARTTR ASELANYYEY
QADLYRYAGL IPDRSR
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