Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1809 |
Symbol | |
ID | 6877793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 1788141 |
End bp | 1788818 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642789678 |
Product | hydrogenase 4 membrane component |
Protein accession | YP_002220237 |
Protein GI | 198283916 |
COG category | [C] Energy production and conversion |
COG ID | [COG4237] Hydrogenase 4 membrane component (E) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCATCA CCGCACAGGG ACTCGCCTGG GGCATCCCCC TGCTGAGGCT CCTCGCCGCC CTCCTCCTGC TGCTCGCTTT CGCCATGCTG GCGCAACGGC GTCTCCTCAC CCTGATCCAT CTCCTGGCTT GGCAGGGAGT AGTCCTCGCG ACCGGCACGG CGCTGGTGGC GCTGCTGACC GGGCAGACGG AGTTGTGGTT TTCCGCAGCT CTGACCCTGG GGCTGAAGGC CATTCTGATC CCAACGGTGC TGCACCGTCT GTTACGACGC CTGCAGGTGC GTGGCGACGT GGAGGCCGTG CTCAACATCC CCCTGACACT GCTCGCCGGC ATCGCGCTGG TCATCTTTGC TTTCTCCCTT GCCGCCCCCA TCACCGCCCT GACCGGCCCC GTGACCCGCG GCATGGTCGG CATTGCCCTC GCCGCCGTGC TGCTCGCTTT CCTGATGATG ATCACGCGGC GCAAGGCCAT TTCTCAGGTG GTGGGTTTTC TGGCCGTCGA TAACGGTCTC TTCTTCGCCG CGACCAGCGC CACCCTGGGC ATGCCGATGA TCGTGGAACT GGGCGTAGCC CTGGATGCCC TGATCGGCTT CGTCATTCTC GGCGTGTTCT TTTTTCAGAT ACGGGAGACC TTCGACAGCA TGGATCTCCA GAATCTGGAA CATATCCGGG AGGAATGA
|
Protein sequence | MTITAQGLAW GIPLLRLLAA LLLLLAFAML AQRRLLTLIH LLAWQGVVLA TGTALVALLT GQTELWFSAA LTLGLKAILI PTVLHRLLRR LQVRGDVEAV LNIPLTLLAG IALVIFAFSL AAPITALTGP VTRGMVGIAL AAVLLAFLMM ITRRKAISQV VGFLAVDNGL FFAATSATLG MPMIVELGVA LDALIGFVIL GVFFFQIRET FDSMDLQNLE HIREE
|
| |