Gene Lferr_1809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1809 
Symbol 
ID6877793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1788141 
End bp1788818 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content63% 
IMG OID642789678 
Producthydrogenase 4 membrane component 
Protein accessionYP_002220237 
Protein GI198283916 
COG category[C] Energy production and conversion 
COG ID[COG4237] Hydrogenase 4 membrane component (E) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCA CCGCACAGGG ACTCGCCTGG GGCATCCCCC TGCTGAGGCT CCTCGCCGCC 
CTCCTCCTGC TGCTCGCTTT CGCCATGCTG GCGCAACGGC GTCTCCTCAC CCTGATCCAT
CTCCTGGCTT GGCAGGGAGT AGTCCTCGCG ACCGGCACGG CGCTGGTGGC GCTGCTGACC
GGGCAGACGG AGTTGTGGTT TTCCGCAGCT CTGACCCTGG GGCTGAAGGC CATTCTGATC
CCAACGGTGC TGCACCGTCT GTTACGACGC CTGCAGGTGC GTGGCGACGT GGAGGCCGTG
CTCAACATCC CCCTGACACT GCTCGCCGGC ATCGCGCTGG TCATCTTTGC TTTCTCCCTT
GCCGCCCCCA TCACCGCCCT GACCGGCCCC GTGACCCGCG GCATGGTCGG CATTGCCCTC
GCCGCCGTGC TGCTCGCTTT CCTGATGATG ATCACGCGGC GCAAGGCCAT TTCTCAGGTG
GTGGGTTTTC TGGCCGTCGA TAACGGTCTC TTCTTCGCCG CGACCAGCGC CACCCTGGGC
ATGCCGATGA TCGTGGAACT GGGCGTAGCC CTGGATGCCC TGATCGGCTT CGTCATTCTC
GGCGTGTTCT TTTTTCAGAT ACGGGAGACC TTCGACAGCA TGGATCTCCA GAATCTGGAA
CATATCCGGG AGGAATGA
 
Protein sequence
MTITAQGLAW GIPLLRLLAA LLLLLAFAML AQRRLLTLIH LLAWQGVVLA TGTALVALLT 
GQTELWFSAA LTLGLKAILI PTVLHRLLRR LQVRGDVEAV LNIPLTLLAG IALVIFAFSL
AAPITALTGP VTRGMVGIAL AAVLLAFLMM ITRRKAISQV VGFLAVDNGL FFAATSATLG
MPMIVELGVA LDALIGFVIL GVFFFQIRET FDSMDLQNLE HIREE