Gene Lferr_1807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1807 
Symbol 
ID6877791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1785219 
End bp1787201 
Gene Length1983 bp 
Protein Length660 aa 
Translation table11 
GC content64% 
IMG OID642789676 
Producthydrogenase 4 subunit B 
Protein accessionYP_002220235 
Protein GI198283914 
COG category[C] Energy production and conversion
[P] Inorganic ion transport and metabolism 
COG ID[COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.370569 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCTCCT GCCTGCCTCT GGATCTCGCC ACGGGGGCAT TGCTGCTCTG GCTGGGTCTG 
GGGCTACTGG GCTTTCTGCT GGGCGGCTGG CCAACCACCG CCTGCCGGTT GATCTTCCCC
CTCAGCAGCG CGGTTGCCCT GCTGCTGGCT GTTACCGGGT TCAGCGCGCT GACGGCCCCT
CCAGATCAAC TGCAGTTGCG CGGACCCCTG CCCGCCTTGC CCTGGTCTTT CCAGATCGAT
CCCCTCTCGG GATTTTTCCT GATTCTGCTG GGGTTGCTGG CCTTCGCGGT AACCCTGTTT
GCCACCGGCT ATTTCCGCGC CCTCTCGGGA CCGGCACTGC GTCGGCTCAT GCTTCAATAC
CACACCTTTC TGCTGGGGAT GGGACTGGTT CTGCTGGCGG CCAATGCCTT CACTTTCCTG
GTCGCCTGGG AAATCATGGC GCTAGCCTCG TATTTCCTGG TGGTGACGGA GCATGAAGAG
CCGGGCAGCC GTCATGCCGG CTTCCTCTAT CTGCTCATCG CCCATCTTGG GGCGCTGGCC
ATTTTGCTGG GCTTCGTCCT CCTCGCCGGA GCGGCCATAG CCCAGGGCGG GCCGTTCAGC
GCCATGCTGC ATGCCCCCCT CGATCCGTTC TGGGCATCGG CCGCCTTTCT CCTGACCTTT
TTCGGATTCA GTGCCAAGGC GGGCTTGCTT CCCCTCCACA TCTGGCTGCC GGATGCCCAT
CCTGCCGCTC CCGCCCCGGT CTCCGCGCTG ATGAGCGGGG CAATGCTGCA GATGGCCTTC
TATGGCATGT TGCGGGTGGA CTTTCTCTTT CTCGGCAATC TGGCCTCGTG GTGGGGTCCC
TTTGTACTAG GGGTGGGTCT GGCGACGGCC CTCTTCGGTG TGCTTTTCGC CGCCGCCCAG
ACGGACATGA AACGTCTGCT GGCCTATTCC TCCATAGAAA ACATGGGGCT GATCATGGTG
GCCTTCGGCC TCGCCCTGAT CTTTCGCACC CATGGACTCG GTGCCCTGGC GGCCCTGGCT
CTGGCCGCCG CCCTGTATCA TGCGCTGAAC CACGCCTTCT TCAAGGGCCT GCTTTTTCTC
GGCAGCGGCA GCGTACTGCA TGGAGCGGGC AGCGTGGCCA TGGATCGACT GGGCGGCCTG
ATCCGGCAGA TGCCTCAAAC CGCATTTTTC ATGCTCCTCG GCACCCTCGC CATCGCCGGG
CTCCCCCCCC TCAACGGCTT CGTCTCTGAA TGGTTGCTCC TGCAGGCGTT CCTGCTGTCG
CCCGCCCTGC CCCAAAGCAC CCTCAGCGCG GTATTGCCCC TGGCGGCCTC CGGCGTCGTG
CTGGCGGTAG CGCTGGCGGC CTACGCCATG GTCAAGTTTT ACGGCATCGC CTTTCTCGGT
CAGGCGCGCG GCGCAGGGCA TGCCCATGAG GGCGGACGCT GGGAACGCTC CGCCATGGCC
CTGCTGAGTG TCGCCTGTAT TTTCCTCGGG CTCTTTCCTG GTGTCCTGTT GAATCTGCTG
CACCCCGTGC TGCAGGAGAT GCTCGGCCAA AGCTTCACCG TCCAGCGGGG GCTGTGGCTG
ACGCCGGTCT CCGCGCAACG CGCCAGTTAC AGTCCGATCA TTTTCTTCCT CGGCATGGCC
ACCGCCCTGG GGCTGGGTTT TCTCTTGATC TGGAGCTTCT TTGGCCGGCC CCTGCGGCGT
GTGCCGGCCT GGGCCTGCGG TTTTCCCGTC CGGACGCCGG CCATGCAGGA TAGTTCACTG
GGGTTTGCGC AACCCCTGCT GCGCATCTTC GCGCCGCTGT ATCAGGCGGA ACGGGAGGTA
GACGGCGCCG GCCGCTGGCG AATGCGGATC GGAGAACCTT TATACCGTGG CTTCTATCAA
CCCCTGAGCC TTCTGGCCTT CTGGCTCTCG GCACAGGTGC TGCGCCTGCA GCAGGGCCGC
ATCACCCTGT ATCTGCTCTA CAGCTTCCTG ACCCTGCTGA TCCTGCTGGC GGTCTGGCGA
TGA
 
Protein sequence
MISCLPLDLA TGALLLWLGL GLLGFLLGGW PTTACRLIFP LSSAVALLLA VTGFSALTAP 
PDQLQLRGPL PALPWSFQID PLSGFFLILL GLLAFAVTLF ATGYFRALSG PALRRLMLQY
HTFLLGMGLV LLAANAFTFL VAWEIMALAS YFLVVTEHEE PGSRHAGFLY LLIAHLGALA
ILLGFVLLAG AAIAQGGPFS AMLHAPLDPF WASAAFLLTF FGFSAKAGLL PLHIWLPDAH
PAAPAPVSAL MSGAMLQMAF YGMLRVDFLF LGNLASWWGP FVLGVGLATA LFGVLFAAAQ
TDMKRLLAYS SIENMGLIMV AFGLALIFRT HGLGALAALA LAAALYHALN HAFFKGLLFL
GSGSVLHGAG SVAMDRLGGL IRQMPQTAFF MLLGTLAIAG LPPLNGFVSE WLLLQAFLLS
PALPQSTLSA VLPLAASGVV LAVALAAYAM VKFYGIAFLG QARGAGHAHE GGRWERSAMA
LLSVACIFLG LFPGVLLNLL HPVLQEMLGQ SFTVQRGLWL TPVSAQRASY SPIIFFLGMA
TALGLGFLLI WSFFGRPLRR VPAWACGFPV RTPAMQDSSL GFAQPLLRIF APLYQAEREV
DGAGRWRMRI GEPLYRGFYQ PLSLLAFWLS AQVLRLQQGR ITLYLLYSFL TLLILLAVWR