Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1807 |
Symbol | |
ID | 6877791 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 1785219 |
End bp | 1787201 |
Gene Length | 1983 bp |
Protein Length | 660 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642789676 |
Product | hydrogenase 4 subunit B |
Protein accession | YP_002220235 |
Protein GI | 198283914 |
COG category | [C] Energy production and conversion [P] Inorganic ion transport and metabolism |
COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.370569 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCTCCT GCCTGCCTCT GGATCTCGCC ACGGGGGCAT TGCTGCTCTG GCTGGGTCTG GGGCTACTGG GCTTTCTGCT GGGCGGCTGG CCAACCACCG CCTGCCGGTT GATCTTCCCC CTCAGCAGCG CGGTTGCCCT GCTGCTGGCT GTTACCGGGT TCAGCGCGCT GACGGCCCCT CCAGATCAAC TGCAGTTGCG CGGACCCCTG CCCGCCTTGC CCTGGTCTTT CCAGATCGAT CCCCTCTCGG GATTTTTCCT GATTCTGCTG GGGTTGCTGG CCTTCGCGGT AACCCTGTTT GCCACCGGCT ATTTCCGCGC CCTCTCGGGA CCGGCACTGC GTCGGCTCAT GCTTCAATAC CACACCTTTC TGCTGGGGAT GGGACTGGTT CTGCTGGCGG CCAATGCCTT CACTTTCCTG GTCGCCTGGG AAATCATGGC GCTAGCCTCG TATTTCCTGG TGGTGACGGA GCATGAAGAG CCGGGCAGCC GTCATGCCGG CTTCCTCTAT CTGCTCATCG CCCATCTTGG GGCGCTGGCC ATTTTGCTGG GCTTCGTCCT CCTCGCCGGA GCGGCCATAG CCCAGGGCGG GCCGTTCAGC GCCATGCTGC ATGCCCCCCT CGATCCGTTC TGGGCATCGG CCGCCTTTCT CCTGACCTTT TTCGGATTCA GTGCCAAGGC GGGCTTGCTT CCCCTCCACA TCTGGCTGCC GGATGCCCAT CCTGCCGCTC CCGCCCCGGT CTCCGCGCTG ATGAGCGGGG CAATGCTGCA GATGGCCTTC TATGGCATGT TGCGGGTGGA CTTTCTCTTT CTCGGCAATC TGGCCTCGTG GTGGGGTCCC TTTGTACTAG GGGTGGGTCT GGCGACGGCC CTCTTCGGTG TGCTTTTCGC CGCCGCCCAG ACGGACATGA AACGTCTGCT GGCCTATTCC TCCATAGAAA ACATGGGGCT GATCATGGTG GCCTTCGGCC TCGCCCTGAT CTTTCGCACC CATGGACTCG GTGCCCTGGC GGCCCTGGCT CTGGCCGCCG CCCTGTATCA TGCGCTGAAC CACGCCTTCT TCAAGGGCCT GCTTTTTCTC GGCAGCGGCA GCGTACTGCA TGGAGCGGGC AGCGTGGCCA TGGATCGACT GGGCGGCCTG ATCCGGCAGA TGCCTCAAAC CGCATTTTTC ATGCTCCTCG GCACCCTCGC CATCGCCGGG CTCCCCCCCC TCAACGGCTT CGTCTCTGAA TGGTTGCTCC TGCAGGCGTT CCTGCTGTCG CCCGCCCTGC CCCAAAGCAC CCTCAGCGCG GTATTGCCCC TGGCGGCCTC CGGCGTCGTG CTGGCGGTAG CGCTGGCGGC CTACGCCATG GTCAAGTTTT ACGGCATCGC CTTTCTCGGT CAGGCGCGCG GCGCAGGGCA TGCCCATGAG GGCGGACGCT GGGAACGCTC CGCCATGGCC CTGCTGAGTG TCGCCTGTAT TTTCCTCGGG CTCTTTCCTG GTGTCCTGTT GAATCTGCTG CACCCCGTGC TGCAGGAGAT GCTCGGCCAA AGCTTCACCG TCCAGCGGGG GCTGTGGCTG ACGCCGGTCT CCGCGCAACG CGCCAGTTAC AGTCCGATCA TTTTCTTCCT CGGCATGGCC ACCGCCCTGG GGCTGGGTTT TCTCTTGATC TGGAGCTTCT TTGGCCGGCC CCTGCGGCGT GTGCCGGCCT GGGCCTGCGG TTTTCCCGTC CGGACGCCGG CCATGCAGGA TAGTTCACTG GGGTTTGCGC AACCCCTGCT GCGCATCTTC GCGCCGCTGT ATCAGGCGGA ACGGGAGGTA GACGGCGCCG GCCGCTGGCG AATGCGGATC GGAGAACCTT TATACCGTGG CTTCTATCAA CCCCTGAGCC TTCTGGCCTT CTGGCTCTCG GCACAGGTGC TGCGCCTGCA GCAGGGCCGC ATCACCCTGT ATCTGCTCTA CAGCTTCCTG ACCCTGCTGA TCCTGCTGGC GGTCTGGCGA TGA
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Protein sequence | MISCLPLDLA TGALLLWLGL GLLGFLLGGW PTTACRLIFP LSSAVALLLA VTGFSALTAP PDQLQLRGPL PALPWSFQID PLSGFFLILL GLLAFAVTLF ATGYFRALSG PALRRLMLQY HTFLLGMGLV LLAANAFTFL VAWEIMALAS YFLVVTEHEE PGSRHAGFLY LLIAHLGALA ILLGFVLLAG AAIAQGGPFS AMLHAPLDPF WASAAFLLTF FGFSAKAGLL PLHIWLPDAH PAAPAPVSAL MSGAMLQMAF YGMLRVDFLF LGNLASWWGP FVLGVGLATA LFGVLFAAAQ TDMKRLLAYS SIENMGLIMV AFGLALIFRT HGLGALAALA LAAALYHALN HAFFKGLLFL GSGSVLHGAG SVAMDRLGGL IRQMPQTAFF MLLGTLAIAG LPPLNGFVSE WLLLQAFLLS PALPQSTLSA VLPLAASGVV LAVALAAYAM VKFYGIAFLG QARGAGHAHE GGRWERSAMA LLSVACIFLG LFPGVLLNLL HPVLQEMLGQ SFTVQRGLWL TPVSAQRASY SPIIFFLGMA TALGLGFLLI WSFFGRPLRR VPAWACGFPV RTPAMQDSSL GFAQPLLRIF APLYQAEREV DGAGRWRMRI GEPLYRGFYQ PLSLLAFWLS AQVLRLQQGR ITLYLLYSFL TLLILLAVWR
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