| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1798 |
|---|
| Symbol | |
|---|
| ID | 6877781 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 1778139 |
|---|
| End bp | 1778942 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642789667 |
|---|
| Product | metallophosphoesterase |
|---|
| Protein accession | YP_002220226 |
|---|
| Protein GI | 198283905 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1692] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR00282] metallophosphoesterase, MG_246/BB_0505 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGGCAC AAATATTGTT TGCCGGTGAT GTAATGGGGT CTGCAGGGCG GCGTGCCTTG
CGGCTGGCGC TGGCGCGGCT GCGGCAGGAG GGGCCGCTGG ACGCGGTGGT GGTGAATGGG
GAGAACGCCG CCGGCGGTAT GGGGATCACG GCGGCCATCG TCCGGGAATT CCGCAGTTGG
GGTGTGGATG TGATTACCGC TGGGAACCAT GTCTGGGATC AGCGGGAGGC GCTGACCTTC
ATCCGGGAGG AGCCGCGCCT GCTGCGGCCC TGCAATGCGC CGCCGGGCAC ACCGGGAGCG
GGCTGGGTGG TGGTGGAGGC GCAGGGCGGC TGGCGTCTGG GGGTGCTCAA TCTCATGGGA
CGGCTGTTCA TGCATCCGGT GTATGACTGC CCGTTCCGCA CTGCGGACGC CGTGCTGGCG
CAAGAGGCGA TGGATTGCGA TGTCATCCTC GTCGATATGC ATGCCGAAGC CACCAGTGAG
AAGACGGCTA TGGGCTGGCA CCTGGCGGGC CGTGTGGCCG GCGTCATGGG CAGCCACACT
CATGTGCCCA CGGCGGATGA GCGTGTGCTC CCCGGCGGCA CCGCCTACCA GAGCGATGCG
GGCATGTGCG GTTGCTACGA CTCGGTGATC GGCGTGGACA AGGACGCCGC CATTCGCCGC
TTCATTACCG CCCTGCCCGG ACACGGAGAA GCGGTGGACG GCGTGGCCAC CTTTTGTGGC
CTGCTGATGA CGGTGGATAC GGGCACCGGC CGATGCAGCG CCGTGCGTCG TGTACGTTAC
GACTTTCCGC AGGAAATATC CTGA
|
|---|
| Protein sequence | MMAQILFAGD VMGSAGRRAL RLALARLRQE GPLDAVVVNG ENAAGGMGIT AAIVREFRSW
GVDVITAGNH VWDQREALTF IREEPRLLRP CNAPPGTPGA GWVVVEAQGG WRLGVLNLMG
RLFMHPVYDC PFRTADAVLA QEAMDCDVIL VDMHAEATSE KTAMGWHLAG RVAGVMGSHT
HVPTADERVL PGGTAYQSDA GMCGCYDSVI GVDKDAAIRR FITALPGHGE AVDGVATFCG
LLMTVDTGTG RCSAVRRVRY DFPQEIS
|
|---|
| |