Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1789 |
Symbol | |
ID | 6877772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 1768787 |
End bp | 1769017 |
Gene Length | 231 bp |
Protein Length | 76 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642789658 |
Product | virulence-associated protein, putative |
Protein accession | YP_002220217 |
Protein GI | 198283896 |
COG category | [S] Function unknown |
COG ID | [COG4456] Virulence-associated protein and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.83139 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCATG CCACTGTTTT TCAGATCAAC CGTAGCCAGG CGATACGTCT GCCCAAGTCG ATAGCCTTTC CGGCAGATGT GAAGCGCGTA GAGGTGGTCG CCATAGGCCG CATGCGCATT CTGGTTCCTG CCGGAGAGTC CTGGGAGAGC TGGTTCGATG GAGAAGGGGT CAGCGCCGAC TTCATGGAAA GCCGTGAGCA ACCCGCCGGC CAGTTCCGGG AACCGTTGTG A
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Protein sequence | MEHATVFQIN RSQAIRLPKS IAFPADVKRV EVVAIGRMRI LVPAGESWES WFDGEGVSAD FMESREQPAG QFREPL
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