Gene Lferr_1789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1789 
Symbol 
ID6877772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1768787 
End bp1769017 
Gene Length231 bp 
Protein Length76 aa 
Translation table11 
GC content59% 
IMG OID642789658 
Productvirulence-associated protein, putative 
Protein accessionYP_002220217 
Protein GI198283896 
COG category[S] Function unknown 
COG ID[COG4456] Virulence-associated protein and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.83139 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCATG CCACTGTTTT TCAGATCAAC CGTAGCCAGG CGATACGTCT GCCCAAGTCG 
ATAGCCTTTC CGGCAGATGT GAAGCGCGTA GAGGTGGTCG CCATAGGCCG CATGCGCATT
CTGGTTCCTG CCGGAGAGTC CTGGGAGAGC TGGTTCGATG GAGAAGGGGT CAGCGCCGAC
TTCATGGAAA GCCGTGAGCA ACCCGCCGGC CAGTTCCGGG AACCGTTGTG A
 
Protein sequence
MEHATVFQIN RSQAIRLPKS IAFPADVKRV EVVAIGRMRI LVPAGESWES WFDGEGVSAD 
FMESREQPAG QFREPL