| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1784 |
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| Symbol | |
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| ID | 6877766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 1764960 |
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| End bp | 1766165 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642789652 |
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| Product | Squalene synthase |
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| Protein accession | YP_002220212 |
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| Protein GI | 198283891 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGGCGA CGGGTCGCGG TGCGCAGATC CGGGTGGGCG GCATAGGGCT GCAAGACTTG
CAGAATGGGC CGGGGATCGT TACATTGCCG CCAGATGACA GGGTGTTTGT GCACACCCGG
ACAAACACAA CAAGGAGTTT GGATGTCACC AGACAGGACC GCATGTTGAT GGCGGCGTTG
GAGCGGGCTT TGGCGTACCA GGCACAAAGC CTTCAGGTTG TTTCCAGAAC TTTTGCCCTG
ACCATCCCCC AGTTGCCGGA AGCGCTCCGG GACGCAGTCG GTAACGGTTA TCTGTTGTGC
CGCATTGCCG ACACCATTGA AGACGATCCG GATATGCCCT GGGAAAAAAA AGCCTGTTGG
CAGGCCAAAT TTCTTCAGGT CGTGGAGGGT GCGGACGATC CCGCCGCCTT TGCTGCCGCA
TTGGGCGCAG ACCTGTCGCC GGAGATGCCC GAAGCCGAGC ACGATCTGAT TCGCCACACT
CCGGAAGTCG TCGCCATCAC CCACAGCCTC AACCCCACCC AGCAGGCGGC ATTGTCCCGC
TGCGTGCGGA TCATGGGAAT GGGGATGGCG GAGTTTCAGC AGCATGCTTC GTTGCAGGGG
TTGGCGGACA TGGCGGCCCT GGATCGCTAC TGCTATGTGG TTGCGGGTGT CGTCGGTGAA
ATGCTCACCA GCCTATTTGT CGAGTTCGAG CCGCTGCTGG CGGAGCATGA TGCGGAGATG
CAGCGTTTGG CGGTGTCCTT CGGGCAGGGC CTGCAGATGA CCAATATTCT CAAGGACATC
TGGGATGACT GGCAGCGCGG TGTGAGCTGG ATGCCACGCG CGCTGTTTCA GCGTCATGGC
TGCGATATCG CGGGGGTGCG GCCCGGCAGT CGGGACCCCG CGTTCCAGGC GGGCCTCACC
GAGCTGCTGG GTATTGCCGC GAACCATCTG CAAAATGCGC TGCGCTATAC GCTGCTGATA
CCGGCCGGGC AGACGGGGAT GCGGGATTTT TGCCTCTGGG CCATCGCTAT GGCGGTGCTG
ACCCTGCGGC GGATTGCCGA AAATCCGGCC TTTGCCTCCG GAAGCGAGGT GAAAATCAGC
CGCCGCAGCG TACATCGGGT GGTATTTCTG TCGCGTCTCC TGCATCGCTC CGATGCGCTC
CTGCAGTGGA GTTTCCGGGT GGGCGTCAAA CCACTGCCTT TGCCTTCCGC TGTCGCGCAA
CCATGA
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| Protein sequence | MTATGRGAQI RVGGIGLQDL QNGPGIVTLP PDDRVFVHTR TNTTRSLDVT RQDRMLMAAL
ERALAYQAQS LQVVSRTFAL TIPQLPEALR DAVGNGYLLC RIADTIEDDP DMPWEKKACW
QAKFLQVVEG ADDPAAFAAA LGADLSPEMP EAEHDLIRHT PEVVAITHSL NPTQQAALSR
CVRIMGMGMA EFQQHASLQG LADMAALDRY CYVVAGVVGE MLTSLFVEFE PLLAEHDAEM
QRLAVSFGQG LQMTNILKDI WDDWQRGVSW MPRALFQRHG CDIAGVRPGS RDPAFQAGLT
ELLGIAANHL QNALRYTLLI PAGQTGMRDF CLWAIAMAVL TLRRIAENPA FASGSEVKIS
RRSVHRVVFL SRLLHRSDAL LQWSFRVGVK PLPLPSAVAQ P
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