Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1778 |
Symbol | |
ID | 6877760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 1757844 |
End bp | 1758719 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642789646 |
Product | hopanoid biosynthesis associated protein HpnK |
Protein accession | YP_002220206 |
Protein GI | 198283885 |
COG category | [S] Function unknown |
COG ID | [COG3394] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03473] hopanoid biosynthesis associated protein HpnK |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGGCAGG GCGGCGGCCG GCGGGTCATC TTCAACGCCG ACGACTTTGG CTTGGATATG GCGGTGAACG AGGCGGTGGA GTCCGCACAC CGTGATGGTG TGCTGACCAC CGCCAGTCTC ATGGTCGCGG CGCCGGCCGC CGCGGATGCC GTCGCCCGTG CCAGAGCGCT GCCCGGCCTG GGCGTAGGGC TGCATCTTAC CTTGGTGGAC GGCACGCCTC TGCTGCCCGC GGAGCAGGTG CCGGATCTGG TCGATGAACA AGGGCGTTTT GCTGCGGATC TCTGGCGGCG CGGGGTGCGC TATTTCTTTT TGCCACAGGT CAGAAAGCAA CTGGCGGCGG AGATCCGTGC CCAGTTCGCC GCCTTTGCGG CCACCGGCCT GGAACTGGAC CACGCCAATG CTCATAAACA TCTGCATCTG CATCCTACGG TGCTGACGCA GATGCTGGAA GTCGGGAAGG AGTTCGGCCT GCGGGCGGTG CGTTTGCCCT GGGAGCCTTT GCGGGCGGCA CGCTGCAGCG GTGCCAAGGG GGTCGCGCCG ACATTCTGGT CCATCTTTCT GGCGCCGTGG CTGGCGCGCA TGCGCCGCCA ACTGGATCGT CGCCGGATCA TGCATAACGA CCAGCTCTAC GGTCTGGACG CCACTGGCCA CATGGACGAG GAGCGACTGC TCCGGATGCT CCGCTGCCTG CCGGCAACCG GGGTTACGGA GATTTATCTG CATCCGGCCA TGGTGCAGAC GGCGGCACTG CACGCCCTCA TGCCGAACTA TGAACCGCAC GCCGAGTGGG CGGCGCTGAC GAGCCCCCGG GTAAAAGATT ATTTGCGCGA TCAGGACATC GCGAAGGGTA CTTTCCGTGA TTTTGTCGCT CGTTGA
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Protein sequence | MGQGGGRRVI FNADDFGLDM AVNEAVESAH RDGVLTTASL MVAAPAAADA VARARALPGL GVGLHLTLVD GTPLLPAEQV PDLVDEQGRF AADLWRRGVR YFFLPQVRKQ LAAEIRAQFA AFAATGLELD HANAHKHLHL HPTVLTQMLE VGKEFGLRAV RLPWEPLRAA RCSGAKGVAP TFWSIFLAPW LARMRRQLDR RRIMHNDQLY GLDATGHMDE ERLLRMLRCL PATGVTEIYL HPAMVQTAAL HALMPNYEPH AEWAALTSPR VKDYLRDQDI AKGTFRDFVA R
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