| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1777 |
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| Symbol | |
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| ID | 6877759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 1755161 |
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| End bp | 1757863 |
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| Gene Length | 2703 bp |
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| Protein Length | 900 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642789645 |
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| Product | hopanoid biosynthesis associated RND transporter like protein HpnN |
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| Protein accession | YP_002220205 |
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| Protein GI | 198283884 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | [TIGR03480] hopanoid biosynthesis associated RND transporter like protein HpnN |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATTTTGT CGCTCGTTGA CCGTTTTCTT CAGCGCTCCG GTGCGCGTAT CTCTCAGGGT
CTGGTGGCCT TGGTGGACCT CTCGGTGCAG CGCGCCGCCT GGATGCTGGC GGCCATCGTG
CTGGCCACAC TGCTCGCCCT GGGCTACTCG GTCGGTCATT TCTCTGTGGA TACCGATACC
AGCCATGCCT TGTCCCGTGA TCTGCCTTTT CAGAAGCGTG AAGTGGCTTA CCAGAAAGCG
TTTCCGCAGG ATAAAAACAC GATTGTGGTG GTCCTCCAGG GCGCTGACCG AAATCTTACG
GATACAGCCG TCGATCGCCT CAGTACTTGG CTGCGCGCCC GGCCACAATC TTTTCACGAC
GTGTATGTGC CGGGCGGCGG GCCTTTTTTC CAGCGTAACG GCCTCTTGTA TCTCTCCCCC
AAACAAGTAC AGGATTTTGC CAACCGCATA ACCGATGCGC AGCCGCTCAT CGCGAGGCTC
TCTGCCGAAC CGAGCCTGAA CGGCCTCAGC AGCCTGTTGA GCATGGCGAT TGGGCAACGC
CTGACCAATG GTGTGCAACT GCCCGGATTG ACGGCTATTT TTTCTGCTCT GGATCAGGCG
CTCACGGCGC AGATGCAGGG CAAATCCTAT ACCATTTCGT GGGGTACACT CATGGGCGGC
GATCTGGCCC GAATGGGGCC GTCGCAACGC TTCGTCATTA TTCAGCCTGC CCTGAATTAC
AAGTCTCTGG AGCCTGCTGC TGCGGCCATA CATACTTTGC GCGCTGGCCT TACCTCGCTC
AACCTGAATG CTGCCCACGG GGTGGACGTT GGGGTGACCG GCGGTGCGGT ACTGGATGCG
GAACAATTAA AAACCGTGAG TCAGGGTGCC GCTGTTTCTC TGGCGCTGAC GTTCACGCTC
GAAATCATTT TGCTGATCAT AGCATTGCGC TCGCTGCAAC TGGTTTTCGG CGTGCTGATG
GGGCTGATCG CCGGAATGAT CCTGACCACC GCCTGGGCAC TGTTTTTTAT CGGTCCCTTC
AATCTTATTT CCGTGGCCTT TGCCATTCTT TTTATCGGTC TGGGCGTTGA TTTTGGTATT
CAGTTCTGCC TGCGTTATCG GGAAGAAGTG TTTAACGGCG CAGTTCACCG GCAGGCCATG
CAGCGAGTGA CACAAGGTAT GGGCGGCGCC TTGAGCCTTG CCGCCGTTGC GGCAGCTTTC
AGTTTTTTTG CTTTCGTGCC TACCAGCTAC GCCGGCATCG TCGATCTCGG ACTGATTTCC
GGCACCAGCA TGCTGGTGGC CTTGTTCATC ACCCTCACCT TCCTGCCCGC TTTTTTGACC
CTCTGGCCTA TGATGGTCAC ACGTACAAAA CCGACGTACT ATCCGCATCT GCGCCAAATT
CCTGCCTTGG TGCGTCACCC CATCCACCGT TATGCCTACT ATGTACTGGG CGTGGTGGCC
CTGCTGGCAC TGGCATCCGT GCCGCTGGTG CTGCGTACCT CTTTTGACTT CAATCCGCTG
CATATGATCG ACCGCCATGC GGAGGGGGTG CGCGTTTTCG AGAAGCTCCT CGCGGATCCA
CAGACGGCGC CCTATCGTAT GGAGGTGCTC ACTCCGGATA TTCCGGCGGC GCAGGCCGTT
GCCGCGCGGG TGGCGCGGCT GCCCACCGTG GCGCAGGCCC TGACGATTTC CAGCTATATT
CCGGAGCATC AAACCGAGAA GCTGGCCATA TTGCAGAACT TGCAGATCCT TGTGCCACCC
TTTTCGCTGC TGATGCCTGC CGGTTTGCAG CCGCCGACGC CCGATACCGC GAAAAGTCTT
GGGGAATTGG TAACCAAATT GCGGGCCCTC GCGCAAAAGG ACGGCGAGAA TACACCCGAC
GGACAGGCGG CGGCGGCGCT GGCTGGCCAT CTCGCGCAGT TTTTGGCGAC CCGTGGCACG
AATGCCCAGG CGATCGCCGA TCTGCAAACG CGGGTGATGG GTACCTTGCC CGGCGAATTG
CAACGCCTCG GCATGGCGTT GTCCGCCACG CCGGTAACCC TGCAGACCCT GCCGAAGTCC
CTGCGCGACC GATATGTGGC GGCCTCTGGC CAGGCACGCG TGGAGATTTT TCCCAAGGCC
AATCTCAGCA GTAATCAGGC GATGGCGACC TTTGTGCGAA GTGTGCTGAA GGTGGAGCCC
AATGCCGTGG GTACACCGGT GATGCTGGTC CAAGGCGGAG ATGCGGTACT CGGTGCCTTT
CAGGAGGCTA CGTTTATTGC GCTGATAGCC ATCAGTCTGC TGCTCCTCCT GGCCTTGCGC
CGCTACCGGG ATGTGTTGCT GATCATGATT CCGTTGCTGC TGGCGGCGCT GTTCACGGTG
GCGGCCATGA CTCTGTTGGG GTTGAGCTTC AATCTCGGCA ACATCATCGT TCTGCCTCTG
CTCATCGGTC TCGGTGTGGC CTTTGCCATC TACATCGTAG TGCGCTGGCG CAACGGTGTG
GATGTGGCGC ATCTGCTCGG GACATCCACC CCCATGGCCG TTTTTTTCAG CGGGCTTACG
ACCCTCAGCG CCTTTGGCAG CATGGCGGTT TCCCGCGATC CGGGTATGGC CAGCCTGGGC
GAGGCGCTGA GCCTCGCCCT GGCCATCGTG CTGCTGTGCA TTCTGATCGT GCTCCCGGCT
TTGCTCCTGC TATTTACCCC GTCACCCCGT GAAGAGGGCA TTGCCCAGGA TGAAGGCAGT
TAA
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| Protein sequence | MILSLVDRFL QRSGARISQG LVALVDLSVQ RAAWMLAAIV LATLLALGYS VGHFSVDTDT
SHALSRDLPF QKREVAYQKA FPQDKNTIVV VLQGADRNLT DTAVDRLSTW LRARPQSFHD
VYVPGGGPFF QRNGLLYLSP KQVQDFANRI TDAQPLIARL SAEPSLNGLS SLLSMAIGQR
LTNGVQLPGL TAIFSALDQA LTAQMQGKSY TISWGTLMGG DLARMGPSQR FVIIQPALNY
KSLEPAAAAI HTLRAGLTSL NLNAAHGVDV GVTGGAVLDA EQLKTVSQGA AVSLALTFTL
EIILLIIALR SLQLVFGVLM GLIAGMILTT AWALFFIGPF NLISVAFAIL FIGLGVDFGI
QFCLRYREEV FNGAVHRQAM QRVTQGMGGA LSLAAVAAAF SFFAFVPTSY AGIVDLGLIS
GTSMLVALFI TLTFLPAFLT LWPMMVTRTK PTYYPHLRQI PALVRHPIHR YAYYVLGVVA
LLALASVPLV LRTSFDFNPL HMIDRHAEGV RVFEKLLADP QTAPYRMEVL TPDIPAAQAV
AARVARLPTV AQALTISSYI PEHQTEKLAI LQNLQILVPP FSLLMPAGLQ PPTPDTAKSL
GELVTKLRAL AQKDGENTPD GQAAAALAGH LAQFLATRGT NAQAIADLQT RVMGTLPGEL
QRLGMALSAT PVTLQTLPKS LRDRYVAASG QARVEIFPKA NLSSNQAMAT FVRSVLKVEP
NAVGTPVMLV QGGDAVLGAF QEATFIALIA ISLLLLLALR RYRDVLLIMI PLLLAALFTV
AAMTLLGLSF NLGNIIVLPL LIGLGVAFAI YIVVRWRNGV DVAHLLGTST PMAVFFSGLT
TLSAFGSMAV SRDPGMASLG EALSLALAIV LLCILIVLPA LLLLFTPSPR EEGIAQDEGS
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