Gene Lferr_1771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1771 
Symbol 
ID6877753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1750259 
End bp1750546 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content62% 
IMG OID642789639 
Productglutamyl-tRNA(Gln) amidotransferase, C subunit 
Protein accessionYP_002220199 
Protein GI198283878 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0721] Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit 
TIGRFAM ID[TIGR00135] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.256606 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTCG ATCAGGATAC GGTGCGGCGC ACGGCACATC TGGCCCGCAT TGCGCTGCCC 
CAGGCGGAGA TACCCGCAGT GGCCGATCAG TTGGAGCGCA TCATGGGGCT GGTGGAAGAG
TTGCGCGCGA TCGAGACGAC GGATGTCCCG ATCATGGCCC ATCCCCTTGA CCTGGATCAG
CCCCTGCGTC CGGATATGGT TGTCCATCAG GATCAGCGTG AGGTGCTCAT GGCAAGTGCC
CCGGCGGCTG AGCACGGGCT TTTTCTCGTC CCCAAAGTTA TCGAGTAG
 
Protein sequence
MAFDQDTVRR TAHLARIALP QAEIPAVADQ LERIMGLVEE LRAIETTDVP IMAHPLDLDQ 
PLRPDMVVHQ DQREVLMASA PAAEHGLFLV PKVIE