| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1759 |
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| Symbol | |
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| ID | 6877741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 1735364 |
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| End bp | 1737580 |
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| Gene Length | 2217 bp |
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| Protein Length | 738 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642789627 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_002220187 |
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| Protein GI | 198283866 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family
[TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTCCAAA GCACGCACCT TCCGCTGACC ATTTGGTTTC TGGCCATCCA TCTGATTAGC
CAGGTTAAGA CGGGCTTGTC TGCACTGGCG CTGAAGCGCC AATTGGGCGT CAGTTATCCC
ACAGCCTGGC GCATCCACCA CAAGCTGACG CAGGCCATGG TTAAACGCGA GGAGATCTAC
ACGCTACAAG ACGAGGTACG AGCCGACGAT GCGTATCTGG GATGCGGACA GCCCTGCGGC
AGGGTTAGTC GCGGGTCGGA AAACAAGGTC CCCTTCGTCG CGGCGGTCCC TCTGGATGAG
CAGCATCATC CCGTCTATGC CAAATTTACG GCCATTATTG ACTTCCCGCG CACTGCAGAT
TGGGCACAAG ACTTCTTCAC GCCCTACTGC ACTGCACTGG CAGACGGACT CGCCCATTTC
AATGGTGTCG CCGATGCATG CTGTCACCAC GATGTGATGG TGGCGGGTGG CCGCAAGCCT
CGGGGCCTGC CTCAGTTCTT GTGGGTCAAT ACCCTGCTCA GCAATCTAAA AACCAGTACC
TCCGGTGCCT ACCACGCTTT CAAATTCAGC AAATACACGC AACTTTACCT CTCCGTCGTG
ACTTACCGCT TCAATCATCG CTTCCGTCAC GCCGATCTTC CGGCAAGCCT GTTCAGAGCC
GCCGCCAGTG TCGCGCCTCG CTCGGAGCGA TGGGGCTCCG CGCAAGAGTG TAATCGTGCT
AATAACTTTT TTGAACGTGG TAATTTTATG ATGGTGAGCC ACGAAATGCT TATGTATTTT
TTTATTATTA TGCGCTTGCG GTTCCCGTTA GTACCACTTC TTTTTTTGAT TCCTAGCGCG
AGTGCAGCGC CTCTCGACCT GCTCGTTCAT GATCCTCTTG ATACCCAGGG ATTGGTAAAG
CAACCGCTGG GACAAATCTG GCATGATCCA CAGCTCAAAC TCCCGCAAAT TCGGCTACCC
AAAGAACAGA CCTTCACCAA AGCCCAAAGC CTCGCTGCGC TTACCACCTA CGCCCTCGCC
CACAATCCGC AAACACGGGT GGCTTTCGAG AATCTGCAGG CGTCCGCAGT GGGGCTGGGG
GTCGCGGAAT CGGCGTGGTT GCCGAGTCTT TCCCTCACCG ACAATGCGGC CCGCTCGCAA
AGTAACACCA CGGCGGGTTT CAGTATTCCG ATCCTCAACA GTAATTCGGA TACACTGAGT
TTAAGTTACG TCCTCCTCGA TTTTGGACTG CGTAGCGCCC AGCGCGACGC GGCACTCGCA
CAGATTTATA TTTCCGGGTT CAACAACAAT AGCGCCCTGA CCAAAGTCGC ACTGACGGTG
ACCCAAAACT ATTACCAGCT GATCGGTGAA CAGGCGCTGG TACGCGCCTA TGCGCAAACC
GTCAAGGAAG ATGAAGCCAA TTTGGACGCC GCACAATTGA AACAGCATGC GGGTATGGCG
ACCATTGCCG ATGTCCTGCA AGCCAAGTCG GCTCTCGCCC AGGCCCAGGC CCAATTGATC
TCCGCCCAGG CGACCGTGCG CTCCGATAAC GGTGCGCTCG CAGGTAGTTG CGGATTGTCA
CCCGGCAATG CCATTCCTAT TGTTCCACTC AATACCCATC GTCTGCCTCC CCATATCACG
CCTTCTGTGC ACTCTCTGGT ATTACATGCG ACCCAAAACA ACCCCAGCGT GCAGGCTGCC
GCCGCCCAGA TACTCGCCAG CCGCGCGACC TTACGCGAAG ATCAGGCGCA AGGTTTACCC
ACTCTCAGCG CCTCGGTATC CGGCGGCAAA CGCTTTCAGA ATGGGTTGGG ACCTTCCCAA
AACTGGGCTA TCGGCCTCAG CCTCAAAGTG CCCCTTTTTA CGGGCTTTCA TGATAGTTAT
CAGATTCAGC AGGCGCGGCG ACAGGAGCGC AGCGCCCGGG CCTCACTGAA CCAGGAGACC
CAAAGTATTG CCTTAACGGT GTATCAGGAT TATCAGACCG TCATGGGTGC GCGCTCGGCG
GCAAAAGCTG CACAAATTGC GGTCAATAGT GCCCAGGCTT CGCTGGCTGC CATTCGCGCC
CAATACAAGG TAGGACTTTC CACCATGCTC AATTTGCTGA CTGCCCAGGC GACGCTGACG
ACTGCTGAGC AGACCCGGAT TCAGGACATT ACAACGGCCT ATGTGCAACT GGCCAATCTC
GCCAACGCCC TGGGAATGAT CGGACTCCCC AACACTACAA CAGGATTCCA CTCATGA
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| Protein sequence | MFQSTHLPLT IWFLAIHLIS QVKTGLSALA LKRQLGVSYP TAWRIHHKLT QAMVKREEIY
TLQDEVRADD AYLGCGQPCG RVSRGSENKV PFVAAVPLDE QHHPVYAKFT AIIDFPRTAD
WAQDFFTPYC TALADGLAHF NGVADACCHH DVMVAGGRKP RGLPQFLWVN TLLSNLKTST
SGAYHAFKFS KYTQLYLSVV TYRFNHRFRH ADLPASLFRA AASVAPRSER WGSAQECNRA
NNFFERGNFM MVSHEMLMYF FIIMRLRFPL VPLLFLIPSA SAAPLDLLVH DPLDTQGLVK
QPLGQIWHDP QLKLPQIRLP KEQTFTKAQS LAALTTYALA HNPQTRVAFE NLQASAVGLG
VAESAWLPSL SLTDNAARSQ SNTTAGFSIP ILNSNSDTLS LSYVLLDFGL RSAQRDAALA
QIYISGFNNN SALTKVALTV TQNYYQLIGE QALVRAYAQT VKEDEANLDA AQLKQHAGMA
TIADVLQAKS ALAQAQAQLI SAQATVRSDN GALAGSCGLS PGNAIPIVPL NTHRLPPHIT
PSVHSLVLHA TQNNPSVQAA AAQILASRAT LREDQAQGLP TLSASVSGGK RFQNGLGPSQ
NWAIGLSLKV PLFTGFHDSY QIQQARRQER SARASLNQET QSIALTVYQD YQTVMGARSA
AKAAQIAVNS AQASLAAIRA QYKVGLSTML NLLTAQATLT TAEQTRIQDI TTAYVQLANL
ANALGMIGLP NTTTGFHS
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