Gene Lferr_1749 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1749 
Symbol 
ID6877731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1725838 
End bp1726704 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content60% 
IMG OID642789618 
Producthypothetical protein 
Protein accessionYP_002220178 
Protein GI198283857 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.167509 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAAGTCA CGGCCGGCAA CACCACGGCC TCCAACCATG TCCAACCAGG ACTGAACCGC 
GTACTGGACT CCCTGAATAC TGAACAGCGC CCTTATCTGG TCCGTGGCGA CTGTGGTTTT
GGTAATGACG CCGTTATTCG GGAAATGGAG TCCCGGCAGC AGCCGTACCT GTTCAAATTA
CGTCAGTCAC CCCGCGTCAA GCGCCTGCTG CAGCGGGTTT TTACCCGCCG GGACTGGGTG
GATGCGGGAC AGGGTTGGGA AGGTCGCGAG GATCGTATTC AACTGGCCGG GTGGCAGCAG
AGCCGTCGGG TGGTCATTCT CCGGCGTTTG CTGAAGCAAA ACCTGATCGC CACCCAGGAA
CAGCAGGGCC AACTGGAATT TGCTTTCGTG GACCGGCGAC AGACCAAGGT CTACGAATAC
GCCGTGCTGG TGACGGATCT TACAGAAAGT ATTCTGGGCA TCGCGCAGAT GTACCGGGAC
CGGGTGGATG CGGAGAACGG TTTTGACGAA CTCAAGAATC AATGGGGGTG GGGTGGCTAC
ACCACCCGGG ATCTGGCGCG TTGCCGACTT TCTGCCCGTG CGGTGGGACT GGTGTATAAC
TGGTGGAGCT GGTATACCCG ACTGGCCTTT CCGGAATCCC GGCGAGAGGC TATCACCAGC
CGTCCATTGC TGCTGTCCGC CATAGGCCGA AGCACGAAAC ACGCTGGACA GACCCAGCTT
TACCTGACGC TCATGCATGC CGCGCAGAAA AAGGTCGAGC GCGGAATTGA GAATATCCGC
CGAGGCTTAC GGGCGGTTCG CCAGACTGCG GAGCGGTTGC TGGGGCGCCA GCCATGGGAC
CTCCTCGTGC GCTACATCGT CGCCTAA
 
Protein sequence
MEVTAGNTTA SNHVQPGLNR VLDSLNTEQR PYLVRGDCGF GNDAVIREME SRQQPYLFKL 
RQSPRVKRLL QRVFTRRDWV DAGQGWEGRE DRIQLAGWQQ SRRVVILRRL LKQNLIATQE
QQGQLEFAFV DRRQTKVYEY AVLVTDLTES ILGIAQMYRD RVDAENGFDE LKNQWGWGGY
TTRDLARCRL SARAVGLVYN WWSWYTRLAF PESRREAITS RPLLLSAIGR STKHAGQTQL
YLTLMHAAQK KVERGIENIR RGLRAVRQTA ERLLGRQPWD LLVRYIVA