Gene Lferr_1745 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1745 
Symbol 
ID6877727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1722006 
End bp1722569 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content57% 
IMG OID642789614 
Producthypothetical protein 
Protein accessionYP_002220174 
Protein GI198283853 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0385777 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCACCC CGAACTCTCC GGGATCGCCC TTGCTCTTCG GGGCACTGGA TTTTTTTGCC 
AAGGTGCACG GGCTGCCATG GTCCAACCAA AGCAGCGACT GGTTTGATCA TGACAACCGC
CATCGCCTTT ATGCGGCTGT CCTTGCCGCC CATCGGCGCG GAGAAGACGC GCCAAAGCCG
TTTGTGTGGG TTTATGTGCG CAAAGGCACG CCAGAAACGT TGTCCATCTG GCGCTACAAC
GCGGAAACGG ATAGGGGTAA ATGGGTGTTG CAAAGCCCGA CCAATACCGG GGTGCCCGGT
GCGATCACCC CCAACGGTAC CTGGGCAGTC TACGCGCGCT TTCTGAGTAC GCGAATGACC
GGTTGTTTTC CCCATGGCGA GTGTTATAAC GATTCAGGCG TGCGCTTCGT CAACTACTTC
TGGGATGGCC GTGCGGTGCA CTATTTTCCC CGTCTTGCGT ACGGGTTTCG GCAAAGTAAC
GGTTGTGTGG AACTGCCGTT AAAGGCGGCA CAAAGAGCCT ATGGAATGAT GCATATCGGT
ACGCCGGTGA CGGTGGCGCC ATGA
 
Protein sequence
MLTPNSPGSP LLFGALDFFA KVHGLPWSNQ SSDWFDHDNR HRLYAAVLAA HRRGEDAPKP 
FVWVYVRKGT PETLSIWRYN AETDRGKWVL QSPTNTGVPG AITPNGTWAV YARFLSTRMT
GCFPHGECYN DSGVRFVNYF WDGRAVHYFP RLAYGFRQSN GCVELPLKAA QRAYGMMHIG
TPVTVAP