Gene Lferr_1742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1742 
Symbol 
ID6877724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1719204 
End bp1719845 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content62% 
IMG OID642789611 
Productdienelactone hydrolase 
Protein accessionYP_002220171 
Protein GI198283850 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.716118 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0129472 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAGGGT CAGAACGGTC CGTTCACATT TCGGCAGAAG GGTTGAGATT GGAAGGCAAC 
TGGGTGATTC CCGAAAACGC CCTCGGCCTG GTGCTCTTTG CTCACGGCAG CGGCAGCAGC
CGCCTAAGTC CCAGGAATAA TTACGTGGCG CAGGTGCTGC GTGACGGCGG TATTGCTACC
TTGCTCTTTG ATCTGCTGAC CGAAGAGGAG GATCGGGTAT ATGCCACCCG CTTCGATATC
GGTCTGCTGA GCGAGCGCCT GGCTTTAGCT ACCCGCTGGA CACAGCGACA GCCGGAGGCA
GCGGGCCTGC CCCTGGGTTA TTTCGGTGCC AGCACCGGCG CTGCGGCAGC CTTGCGCGCA
GCCGCCCAAT TTGGTGACGC TATCGCTGCT GTGGTCTCCC GCGGCGGGAG GCCTGATCTG
ACCGGACCGG CCATCTCCCG GGTGACGGCT CCTACCCTCC TGATCGTCGG TGGTCTCGAC
GATGTGGTCA TCGGCATGAA TGAAACGGCC TACGCCGAGC TGCGGGCAGA GAAGCAGATG
GTCATTGTTC CCGGCGCCAC CCATCTTTTT GAGGAGCCAG GCACCTTGGA AGAGGCCGCA
AGCCTGGCCT TGGCGTGGTT TCAGCGCCAT TTCAAGAAGT AG
 
Protein sequence
MVGSERSVHI SAEGLRLEGN WVIPENALGL VLFAHGSGSS RLSPRNNYVA QVLRDGGIAT 
LLFDLLTEEE DRVYATRFDI GLLSERLALA TRWTQRQPEA AGLPLGYFGA STGAAAALRA
AAQFGDAIAA VVSRGGRPDL TGPAISRVTA PTLLIVGGLD DVVIGMNETA YAELRAEKQM
VIVPGATHLF EEPGTLEEAA SLALAWFQRH FKK