| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1729 |
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| Symbol | |
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| ID | 6877711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 1701767 |
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| End bp | 1702582 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642789598 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_002220158 |
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| Protein GI | 198283837 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0992895 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00555362 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGAGCAGT TTGCAGAGCC GAGAGGCACC CGTTGGGCAC TGGGCCTTGA ATACGATGGC
AACGGATTCT GTGGCTGGCA ACGCCAGTTG GATCAGGACA GTGTACAAGG TGTTGTTGAG
GCGGCGTTGA GTCGGGTGGC CCAGTGCCCA ATCTCTGTCG TCGTCGCCGG GCGAACCGAT
ACGGGGGTGC ATGCCCTGTG TCAGGTGGTG CATTTCGACA GCCCGGTGCT GCGGCGTCCC
GAGGCCTGGG TGCGTGGTGC CAATACCGCA TTACCCGCGG GGGTGGCGCT GCGTTGGGCC
CGGGTCGTCC CGGATAGCTT CCACGCCCGT TTCTCCGCTA CGGCCCGGCG TTATCGTTAT
GTGATTCTCA ATCGTCGCGA GAAATCCGCC CTATGGCGGA ATCACACCGC CTGGATATAC
AGCCCCCTGG ATGTGGAGGC CATGCAGGCA GCGGCGCAAA CCCTGCTGGG CACCCATGAT
TTTTCCGCTT TTCGCGCCGC CGCCTGCCAG GCCAAAAGTC CTGTACGGAA TTTGTGCCAG
CTTCGGGTCG TCCGGCGGGG CGATCTGATT GCCGTCGATG CCGAGGCCAA CGGTTTCCTG
CATCACATGG TGCGTAATCT TGTGGGTGTG CTGATCGCCA TCGGCAAGGC TGACCGGCCC
GTGGACTGGG CGGCGGAGGT GCTGGCCAGT CGCGATCGCT GTCGGGCCGG CGTTACGGCC
CCGCCGGGTG GGCTTTATTT CGTGGCGCCG CGTTATCCTG CGGAGTTCGG GCTGCCGGTG
GATGCAATGG ACGCCGGTTT CCTGACGGGC GATTGA
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| Protein sequence | MEQFAEPRGT RWALGLEYDG NGFCGWQRQL DQDSVQGVVE AALSRVAQCP ISVVVAGRTD
TGVHALCQVV HFDSPVLRRP EAWVRGANTA LPAGVALRWA RVVPDSFHAR FSATARRYRY
VILNRREKSA LWRNHTAWIY SPLDVEAMQA AAQTLLGTHD FSAFRAAACQ AKSPVRNLCQ
LRVVRRGDLI AVDAEANGFL HHMVRNLVGV LIAIGKADRP VDWAAEVLAS RDRCRAGVTA
PPGGLYFVAP RYPAEFGLPV DAMDAGFLTG D
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