Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1728 |
Symbol | |
ID | 6877710 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 1701095 |
End bp | 1701706 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642789597 |
Product | Phosphoribosylanthranilate isomerase |
Protein accession | YP_002220157 |
Protein GI | 198283836 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0135] Phosphoribosylanthranilate isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.306335 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00483506 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGTGCGGA TCAAGATATG TGGTATCACG AACACGGAGG ACGCCCGCGC GGCGGCCGCC GCCGGCGCGG ATGCCGTCGG GCTGGTGTTC TACCGTAGCA GTCCGCGGGC TCTGGATGCC GTGCGTGCCC GGAAAATTCT TGCTGCACTG CCGCCGTTCG TCACGCGCGT CGGCCTTTTC GTCAACGCGG AAGCTGCCGA TGTGGCCGCT ACGCTGCAGC AGTGCCCTCT GGATGTCCTG CAATTTCATG GTGATGAATC GCCATCCCTT TGCCGGGGAT TCGGCCGTCC CTACATCAAG GTGTTGCGGG TGACTGCAGC GCAAGACCTG CGGCCGGCGG TGGACGCCTA TCACGACGCG CAGGGACTGC TGCTGGACTG CGCCGCGCCG GGCGTCTGGG GGGGCTCGGG CCGAAGTTTT GACTGGTGGC GACTGCCGGA TCTGGGTAAG CCATTGATTC TGGCTGGTGG GCTGCATGCC GAAAATGTTG CTGAGGCCAT CGCCATCGCC CGGCCTTATG CGGTAGATGT GAGCAGCGGG GTGGAACTGT CGCCCGGACG CAAAGATCAT GACAAAATGG CACGGTTTGT CGCACGGGTG CGCGGTACCT GA
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Protein sequence | MVRIKICGIT NTEDARAAAA AGADAVGLVF YRSSPRALDA VRARKILAAL PPFVTRVGLF VNAEAADVAA TLQQCPLDVL QFHGDESPSL CRGFGRPYIK VLRVTAAQDL RPAVDAYHDA QGLLLDCAAP GVWGGSGRSF DWWRLPDLGK PLILAGGLHA ENVAEAIAIA RPYAVDVSSG VELSPGRKDH DKMARFVARV RGT
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