Gene Lferr_1728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1728 
Symbol 
ID6877710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1701095 
End bp1701706 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content64% 
IMG OID642789597 
ProductPhosphoribosylanthranilate isomerase 
Protein accessionYP_002220157 
Protein GI198283836 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0135] Phosphoribosylanthranilate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.306335 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00483506 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTGCGGA TCAAGATATG TGGTATCACG AACACGGAGG ACGCCCGCGC GGCGGCCGCC 
GCCGGCGCGG ATGCCGTCGG GCTGGTGTTC TACCGTAGCA GTCCGCGGGC TCTGGATGCC
GTGCGTGCCC GGAAAATTCT TGCTGCACTG CCGCCGTTCG TCACGCGCGT CGGCCTTTTC
GTCAACGCGG AAGCTGCCGA TGTGGCCGCT ACGCTGCAGC AGTGCCCTCT GGATGTCCTG
CAATTTCATG GTGATGAATC GCCATCCCTT TGCCGGGGAT TCGGCCGTCC CTACATCAAG
GTGTTGCGGG TGACTGCAGC GCAAGACCTG CGGCCGGCGG TGGACGCCTA TCACGACGCG
CAGGGACTGC TGCTGGACTG CGCCGCGCCG GGCGTCTGGG GGGGCTCGGG CCGAAGTTTT
GACTGGTGGC GACTGCCGGA TCTGGGTAAG CCATTGATTC TGGCTGGTGG GCTGCATGCC
GAAAATGTTG CTGAGGCCAT CGCCATCGCC CGGCCTTATG CGGTAGATGT GAGCAGCGGG
GTGGAACTGT CGCCCGGACG CAAAGATCAT GACAAAATGG CACGGTTTGT CGCACGGGTG
CGCGGTACCT GA
 
Protein sequence
MVRIKICGIT NTEDARAAAA AGADAVGLVF YRSSPRALDA VRARKILAAL PPFVTRVGLF 
VNAEAADVAA TLQQCPLDVL QFHGDESPSL CRGFGRPYIK VLRVTAAQDL RPAVDAYHDA
QGLLLDCAAP GVWGGSGRSF DWWRLPDLGK PLILAGGLHA ENVAEAIAIA RPYAVDVSSG
VELSPGRKDH DKMARFVARV RGT