Gene Lferr_1716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1716 
Symbol 
ID6877698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1689177 
End bp1689512 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content54% 
IMG OID642789585 
Productpreprotein translocase, YajC subunit 
Protein accessionYP_002220145 
Protein GI198283824 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.741067 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTTT CGCCTATCGC CAACGCTTAT GCCGGGACTG CGGCGGGGGC AGGTCCGGAC 
TCCTTTTTTA TCCAAGTCAT CCCGCTGGTT GCCATCTTCG CTATTTTCTA TTTCCTGCTG
ATCCGACCGC AGACCAAAAA GGCGAAGGAA CAACGCCAGT TGATCGCGAC GATCTCCAAA
GGCGATGAAG TGATTACCCA GGGTGGACTG GCCGGACGGA TCATGCAGGC GGGTGAGGAT
TACCTGCAAC TTGAGGTGGC TGAAGGAGTC ATTGTGAAGG TGCAGCGGGC CTCAGTGACG
TTGTTATTGC CCAAAGGGAC GCTGAAAAAA CTGTAA
 
Protein sequence
MNFSPIANAY AGTAAGAGPD SFFIQVIPLV AIFAIFYFLL IRPQTKKAKE QRQLIATISK 
GDEVITQGGL AGRIMQAGED YLQLEVAEGV IVKVQRASVT LLLPKGTLKK L