Gene Lferr_1710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1710 
Symbol 
ID6877691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1681126 
End bp1681542 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content62% 
IMG OID642789578 
Producthypothetical protein 
Protein accessionYP_002220139 
Protein GI198283818 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAAAA AATCATTTTT CATCCCTATC TTGGGCGCTG TCCTGTGTCT GCCGGCCGGG 
GTTGTCCTCG CCGCAGATGC GGCCCCCGCT GCCGGACAGG TTCAAAACCA GATGATGTAT
GGCAGCCAGT TGATGACCCC CAAGCAGCGA GTGGAGTATC GCGCTAAATT GCGGGCGGCC
AAGACTATCC AGGAACGCGA ACGGATACGT CAGGAACACC ACGAAGAGAT GATGGAACTG
GCCAAGAAAA GAGGGGTGAC CTTACCCGCC GTACCGCCCG CAGGCGGCGC AGGCATGGGT
CCCGGCCGTA TGAACGGTGG CGCCGGTATG GGTGGCGGCG CGGCGGGTAT GGGTCCTGGT
ACCGGAATGA TGGGAACCGG CGCAGGCGGT GGAATGGGTG CCGGTCCGCG GCGTTAA
 
Protein sequence
MSKKSFFIPI LGAVLCLPAG VVLAADAAPA AGQVQNQMMY GSQLMTPKQR VEYRAKLRAA 
KTIQERERIR QEHHEEMMEL AKKRGVTLPA VPPAGGAGMG PGRMNGGAGM GGGAAGMGPG
TGMMGTGAGG GMGAGPRR