Gene Lferr_1697 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1697 
Symbol 
ID6877678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1663040 
End bp1663351 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content52% 
IMG OID642789565 
ProductPropeptide PepSY amd peptidase M4 
Protein accessionYP_002220126 
Protein GI198283805 
COG category[S] Function unknown 
COG ID[COG3212] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.2523 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTAT CTACAAAGTT GGCAAGTGGT ATTTTGGGCG GGGTTTTGTT CCTGTATGCT 
TTTGGTGCTT ACGCTTTTAC CGGTCAGGAA TTGGCTGGCG AGGCGAAGAT CAGCATCGCA
CAGGCACGCA TTACTGCTTT GCGGGCGTAT CCTGGAAGTA TCACCGATGA GGAACTGGAA
AAAGAGAAAG GTGGCAGTGG CTTGCGCTAT TCTTTCGACA TCAAGAAGGG TGGTGTCAGC
CACGAAGTAG GCGTTGACGC CAGGACCGGA GCCGTTCTGG AGAACTCGAT TGAGGGCAAC
CATGCGGATT GA
 
Protein sequence
MKVSTKLASG ILGGVLFLYA FGAYAFTGQE LAGEAKISIA QARITALRAY PGSITDEELE 
KEKGGSGLRY SFDIKKGGVS HEVGVDARTG AVLENSIEGN HAD