Gene Lferr_1695 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1695 
Symbol 
ID6877676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1660996 
End bp1662303 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content53% 
IMG OID642789563 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_002220124 
Protein GI198283803 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGTT CTTTGCAGGG ACGTTTGTCC ATTGGGTTGA GTATTGCTAT TGTCTGCATG 
GGGTTGTTTG CCGGCTTGGC GTCTTTCTTT CTGGCTTTGA ATGAAGCACA GGATTATCAG
GATGCCTCAC TGCAGCAGAT CGCTGCACTG GTGCCTCCCC AGATCTGGCG GAATACATAT
CGCTATGGTC GAGAGCCGGT GGATGTCGAC TCGGATGTGC GCATTGTGGT TGAGCCGTTA
TGCCTGGTAA ATTGCCAGGG AGTGGATGTT CCCCTGAAAC TTCCTCCGCA ATTGTCATCA
GGTTTTCATA CGCTTGCAGT GAACGGTCAG GAATGGCGCG TTTTTGTTCG ACGACAGGGC
CCTGATGAAG CATTGGCAGT GGCCCAGTCC ACCGATTTGC GTAGTGACGC GGCTATTGCC
AGCGCACGGC GTACCCTGCT GCCCTTGTTG TTTTTGGTGC CCTTGTTGAT TGTTTTTTCG
CACGTTATTG TGCGGCGTAG TTTGGCCCCG ATCCAGAGTC TGGCCCAGGC CATGGATCGG
CAAAATGCCG ACCGCCCTGA GCCGCTTTCT CTAGAGCAAG TGCCGGGGGA GATTGCCCCT
TTTCTTCAGG CCATCAATCG GCTGCTGGAA AGGATTCGGA TACTGCTGGA GCAAGAGCGT
CGTTTCATTG CCGACGCCGC CCATGAACTA CGTACCCCGC TAACCGCATT GTCGCTCCAG
GTGCAGAATC TGGAGCGGGC TGATTCTCTC TCGGAATGCC AAAAACGTTT GTTGCCTTTG
CAAAGTGGTC TGGAGCGGTC CCGCCATTTG CTCGATCAAT TACTGGGTTT GGCGCGGCAG
CAGACCGCCA CGTCCAGCTT TGAGCCAGTA GACTTGGCGG TAATTGCTCG CCAAACAGTG
GAAGATCTTT ACCCATTGGC AGAGCAGAAA AAAATAGATT TCGGACTGGA TGCCTCAACG
GCGTTGTGGG TACAGGGAAG CGCTGCCGCC TTTTATAGCC TATTACGCAA CGCGGTGGAT
AACGCCTTGC GCTATAGTCC GGAAAACTCC GAGGTAACCG TGCGTGCCTA TCAGGAAGGA
GAATATGCGC TGTTGGAAGT TATAGATAGT GGGCCGGGTA TTCCGGCTGA TGAGGCCGAA
CGCATATTTG ATCCTTTTTA TCGTATCCCC GGTATAACGG GAGACGGGAG CGGTCTGGGC
TTAACCATTG TTCGTGCCAT TGCCGAACAG TTGGGCGGAC AAGTTATATT GCGTTCCCGA
TGTGACCAAT CAGGCTTGCA TTTCATCTAT CGCCAAAAAA TAGTCTAA
 
Protein sequence
MKSSLQGRLS IGLSIAIVCM GLFAGLASFF LALNEAQDYQ DASLQQIAAL VPPQIWRNTY 
RYGREPVDVD SDVRIVVEPL CLVNCQGVDV PLKLPPQLSS GFHTLAVNGQ EWRVFVRRQG
PDEALAVAQS TDLRSDAAIA SARRTLLPLL FLVPLLIVFS HVIVRRSLAP IQSLAQAMDR
QNADRPEPLS LEQVPGEIAP FLQAINRLLE RIRILLEQER RFIADAAHEL RTPLTALSLQ
VQNLERADSL SECQKRLLPL QSGLERSRHL LDQLLGLARQ QTATSSFEPV DLAVIARQTV
EDLYPLAEQK KIDFGLDAST ALWVQGSAAA FYSLLRNAVD NALRYSPENS EVTVRAYQEG
EYALLEVIDS GPGIPADEAE RIFDPFYRIP GITGDGSGLG LTIVRAIAEQ LGGQVILRSR
CDQSGLHFIY RQKIV