| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1693 |
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| Symbol | |
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| ID | 6877674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 1656314 |
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| End bp | 1658719 |
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| Gene Length | 2406 bp |
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| Protein Length | 801 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642789561 |
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| Product | DNA topoisomerase IV subunit A |
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| Protein accession | YP_002220122 |
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| Protein GI | 198283801 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.182057 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAACA CCCGGGATCT TTTTGATCTC ATCGGTAATG CGCACTCTCC GGAAACCGGG
GCGGTCACCG ACAACACGCC TGCTCCGGTG CCAGCCGAAC CGTTGCAGGA AGTCGCAGCG
TTATCCGCTG CCTCGCCAGC ACCACCGCCT CCGCCATTCG GGAATGGTGC CCCGGACTCT
GGCGAACCTG GGGAGCCGCC GCTCGCGGAA TATGCCGCAC GTGCTTACCT TGCCTACGCC
ATGAGTGTGG TAACCGGGCG GGCGATTCCG GCACTGGCCG ACGGCCAGAA ACCGGTGCAA
CGGCGGATTC TCTATGCCAT GCGCGACATG GGGTTGCAAC GCTCACCACA GCATGTCAAG
TCCGCCCGGG TGGTGGGCGA GGTGATCGGC AAGTGGCACC CCCACGGCGA CACGTCGGTA
TATGACGCCA TGGTGCGTAT GGCCCAGCAC TTCACCCTGC GCTACCCGGT GGTGGATGGG
CAGGGCAACT TCGGGTCTCT GGACGGCGAC TCGGCTGCCG CCATGCGCTA CACCGAGGCC
AATCTGACCC CCATTTCCGA GCTGCTGCTG GCAGAAATGG ATGAGGGCAC GGTGGATTTT
CGCAGCAACT ATGACGGTAC GCTGGAGGAA CCTGTCACCT TGCCGGCCCG GTTGCCCTTC
CTGCTGATGA ACGGCGCCTC CGGTATCGCG GTCGGCATGG CTACGGAGAT TCCGCCCCAC
AATTTGCGCG AACTGGCGCA GGTCTGTGCG GAGTTGGTCT TGCGCCCGGA CATGGCCGAT
GACGAAATAC TGCAGCAGAT TCCCGGTCCC GACTTCCCTG GCGGTGGCCA GATTATTTCC
ACACCCGGGC AAATCCGCGA GGCCTATCTG TCGGGGCGCG GCAGCATCCG GGTGCGTGCC
CGCTGGGAGG TCGAAAAGCT GGCGCGCGGG GAGTGGCGTA TCGCGGTACA GCAACTGCCA
CCGGGGGTGT CCACCGCACA GATCCTCTCG GAGATAGAAA CCCTTTCCAA CCCGCAGGCC
AAAGGGGAAG GCAAGAAAAA GGCGCTTACC CCGGAGCAGC AGGCCACGAA AAATGCCATG
CTGTCCCAGA TGGATACCGT GCGCGACGAG TCGGGCAAGG CCCATGCCGT GCGGATCGTC
ATCGAGCCGC GCTCGCGCAA CCAGGACCCG CAGAGTCTGA TGACCTACCT GCTGGCCCGC
ACCTCGCTGG AATCCAATCA GTCGGTGAAT CTCACGGTGC TGGATCTGGA TGGCAAAGCA
CCGTGTATGC CGCTCACCCG GATATTACGG CAGTGGGTGC GCTATCGGGT GACTACCGTA
CGGCGGCGGA GCCAGTTCCG CCTCGACAAG GCCCTGGCGC GCATCCATAT TCTCGAAGGC
CGTTTACGGG TGCTGCTGGA TATTGATGCG GTGATCCGTG TAATCCGCGA GTCCGACGAC
CCCAAGGCCG ACCTCATGAC CCACTTCGAC CTCAGCGAGA TTCAGGCAGA AGATATCCTG
GAGATTCGTC TGCGGCAACT GGCGCGACTA GCCGGCATTG AGCTGGAAAG GGAACTGGCC
GACAAACAGG AAACGGCGGC GTACCTGAGC GCACTTCTGC AGGATGAGTC CCGACTGCGG
GCATTGATTG CCGAAGAAAT CCAGGCCGAC GCCAAAAAAT TTGGCGATGA TCGTCGCACC
CTGCTGGAAG CCGATACCGC CATCACCAAC AAATCCATCC AGACCATTGC CGCTGCCATT
ACGGATGAAC CAGTTACGGT GATCGTCTCG CAAAAAGGCT GGCTGCGTAC CCGCTCCGGC
CACGGGCTGG ATACGGCGAC CCTGGGTTTC AAGGAAGGCG ATGCCTTGTT GCAAGCCTTC
GAGGTGCGAT CCGTAGATAC TCTGGTCCTG CTGGATCATT CTGGGCGTGC CTACTCCATA
GCCGTGGCGC AAATACCGGG CGGGCGGGGC GACGGCATTC CCGTATCGAG CCAGGTGGAT
TTTCAGCCGG GCGGCGTACT GGCTTCCGTA GCCTGCGGCG CCGGCGATAG CCTATGGCTG
GTGGCTGGAA CCGGTGGCTA TGGATTCCTG ACCACGCTGG AAAACATGAC CGGTCGGAAC
CGGGCGGGCA AGGCTTTTTT GACCCTGGAC CCGAAGGAGC GCCCCCTACC TTTGATCCGC
GTCACCGACC TTCAGGCGGA AGCGCTCTGT CTGTCTTCAG ACGGGCGTGG CCTGCTGTTT
CCTTTGGTGG ATGTCAAAAA CCTACCCAAG GGTAAGGGGG TCAAACTGAT TGCCCTGGGC
GCATCGGCCA CTCTGCAATC CCTGTCGGTT TATCTGGACG ATCAGCCCTT GCCGCGCGGA
ATGAGGAAAA ATCGTGTGGA AGCCTGTCGT GGCCGGCGTG GCGGACGCGG CAGACCCGTG
CGTTAG
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| Protein sequence | MDNTRDLFDL IGNAHSPETG AVTDNTPAPV PAEPLQEVAA LSAASPAPPP PPFGNGAPDS
GEPGEPPLAE YAARAYLAYA MSVVTGRAIP ALADGQKPVQ RRILYAMRDM GLQRSPQHVK
SARVVGEVIG KWHPHGDTSV YDAMVRMAQH FTLRYPVVDG QGNFGSLDGD SAAAMRYTEA
NLTPISELLL AEMDEGTVDF RSNYDGTLEE PVTLPARLPF LLMNGASGIA VGMATEIPPH
NLRELAQVCA ELVLRPDMAD DEILQQIPGP DFPGGGQIIS TPGQIREAYL SGRGSIRVRA
RWEVEKLARG EWRIAVQQLP PGVSTAQILS EIETLSNPQA KGEGKKKALT PEQQATKNAM
LSQMDTVRDE SGKAHAVRIV IEPRSRNQDP QSLMTYLLAR TSLESNQSVN LTVLDLDGKA
PCMPLTRILR QWVRYRVTTV RRRSQFRLDK ALARIHILEG RLRVLLDIDA VIRVIRESDD
PKADLMTHFD LSEIQAEDIL EIRLRQLARL AGIELERELA DKQETAAYLS ALLQDESRLR
ALIAEEIQAD AKKFGDDRRT LLEADTAITN KSIQTIAAAI TDEPVTVIVS QKGWLRTRSG
HGLDTATLGF KEGDALLQAF EVRSVDTLVL LDHSGRAYSI AVAQIPGGRG DGIPVSSQVD
FQPGGVLASV ACGAGDSLWL VAGTGGYGFL TTLENMTGRN RAGKAFLTLD PKERPLPLIR
VTDLQAEALC LSSDGRGLLF PLVDVKNLPK GKGVKLIALG ASATLQSLSV YLDDQPLPRG
MRKNRVEACR GRRGGRGRPV R
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