Gene Lferr_1683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1683 
Symbol 
ID6877664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1644825 
End bp1645649 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content55% 
IMG OID642789551 
Producthypothetical protein 
Protein accessionYP_002220112 
Protein GI198283791 
COG category[S] Function unknown 
COG ID[COG0393] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.187781 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATA CCGCTGAACA ACTGGCTCCT CATGCCGTCG AACGTCTGAA GGGTTTACGC 
TCGCAGGGCA GCCATGAGGG CATTTTTACC TCTGATCTCT CCGTCAATGA GTTCGTCATG
GTCCGCAAGG CCAATTTTGA GCCATTGGGG CTGGTAGTAG GCTCGTGTAT TTACCACATG
GGTATTCAGT ATGGAAACTG GAACCAGAAC ATGGAGATGG ACGTTCTTTC TCAGGCGATG
TATCAAGCGC GTGAGCTGGC CATGAGCCGC ATGGAACAGG AGGCCATCCT GCTACAGGCG
GATGGTATCG TCGGTGTGCG CCTGGAAGTC AAACGCATGG AATGGGATCA GGAAATTCTC
GAATTCATGG CGATTGGTAC AGCCATCGCG CATCGCAGCG GCGCCTCCGG TTTCAAGGGG
GTGGGGGGCA AACCCTTTAC CAGCGATCTC AGTGGGCAGG ATTTCTGGAT GCTGCTGCAG
GCGGGTTACC GGCCGATGGA AATGGTGATG GGTTCCTGTG TGTACCATGT CGCCCACCAG
GGGATGTTGA AATCCCTGGG CAATGTCGGA CGCAATACGG AAATGGAGCA ATTTACCCAG
GCCATGTATG ACGCCCGTGA ATTGGCGATG GAACGGATGC AACATGAGGC CCAGGAGGCA
CAGGCGGACG GCATTACCGG CGTACAACTG CATGAAGGCA GTCATAACTG GAAGCCGCAT
ATCATCGAGT TTTTTGCGGT GGGCACGGCA GTGAAGGCCA TGGAAAATGC CGATGCGCTG
GTTGATGCCC TGAGTCCGCA ACTGGTGATT CCGGTGAATG ATTGA
 
Protein sequence
MTDTAEQLAP HAVERLKGLR SQGSHEGIFT SDLSVNEFVM VRKANFEPLG LVVGSCIYHM 
GIQYGNWNQN MEMDVLSQAM YQARELAMSR MEQEAILLQA DGIVGVRLEV KRMEWDQEIL
EFMAIGTAIA HRSGASGFKG VGGKPFTSDL SGQDFWMLLQ AGYRPMEMVM GSCVYHVAHQ
GMLKSLGNVG RNTEMEQFTQ AMYDARELAM ERMQHEAQEA QADGITGVQL HEGSHNWKPH
IIEFFAVGTA VKAMENADAL VDALSPQLVI PVND