Gene Lferr_1677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1677 
Symbol 
ID6877657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand- 
Start bp1641239 
End bp1641850 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content58% 
IMG OID642789544 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002220106 
Protein GI198283785 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.786941 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTACTCG AACCCCGCAA GCGCCCTCAT CAACAACGTT CTGCCGCCAC GGTGGATGCC 
ATCCTGGAGG CGGCGGCTCG TATTCTGGAG CGCAAGGGGC TGGATGCGCT GACCACCAAT 
GCGGTCGCAG AACTCGCGGG TGTCAGCATC GGATCGCTCT ATCAATACTT TCCAGGCAAG 
GCAGCGATTC TGGCCGGGCT GATTCGGCGG GAACGCCTTA TATTGCTGGC AGGTATTGAC 
CGCATAGCGC ATGCCCCCGG CGACTCGCTA AAAGACGACG TATGTTCACT CATCCGGATC 
GCGGTGGCCC ACCAGTTGCT CCGGCCAGCG TTGGCTCGGG CGCTGGAGTA TGGGGAAGCC 
ACACTGCCCC TGGGACCTGA AACAGGCAAA CTGACGAATG AGCTTGTGCG GTATATGGCG 
ACGTTACTGG AACGACATGG TGTTTCAAAG GTTATGGAGG CGGCACATGA TCTGGTCGCT 
CTTGCAAAGG GCATGATTGA CGCCGCAGGT ATTGCTGGCG AATCAGACCA GCGCGTACTC 
GTTGATCGGG TATGCCGTGC AGCACTGGGA TATCTGGAAT ATCCAGTGGC CATTAGGCAC 
GGAATCGCTT GA
 
Protein sequence
MLLEPRKRPH QQRSAATVDA ILEAAARILE RKGLDALTTN AVAELAGVSI GSLYQYFPGK 
AAILAGLIRR ERLILLAGID RIAHAPGDSL KDDVCSLIRI AVAHQLLRPA LARALEYGEA 
TLPLGPETGK LTNELVRYMA TLLERHGVSK VMEAAHDLVA LAKGMIDAAG IAGESDQRVL 
VDRVCRAALG YLEYPVAIRH GIA