| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1663 |
|---|
| Symbol | |
|---|
| ID | 6877643 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 1632496 |
|---|
| End bp | 1633167 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642789530 |
|---|
| Product | 3,4-dihydroxy-2-butanone 4-phosphate synthase |
|---|
| Protein accession | YP_002220092 |
|---|
| Protein GI | 198283771 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.705063 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGTTC AAACTACCAT GTTGTTGAAG AGTGATGTTG CTGTAGCCCG CCCGGAGTGG
CAGCGGGCAC TCGAGGCCAT TCGTGCCGGC CGCCCGGTTA TTCTCCTGGA TGATTCCGAT
CGGGAAAACG AAGGTGACCT TATTGTCGCT GCCGAACGTC TGACCGTGGC GACCATGGCG
ATGTTGATCC GTGAGTGCAG CGGAATCGTG TGCTTGTGCC TTACCCCGGA GCATGTGGCC
CGCTTGGATT TGCCGCCCAT GGTGCAACAG AACGAAAGCC GCTTCGGTAC TGCCTTCACG
GTTTCCATAG AGGCTCGGGA AGGGGTGACC ACCGGGGTAT CGGCAGCGGA TCGTGTGACT
ACCATTCGGG CGGCTATCGC GTCCGGCGCC CGGCCCTGGG ATATCGCCCG TCCCGGCCAT
ATCTTTCCGT TGTGTGCGCA TCCGGAGGGG GTATTAGGCA GGCGCGGGCA TACGGAAGGT
TCCGTTGATC TGGCGCGACT GGCGGGCCTG GAACCTGCAG CGGTGCTCTG CGAGTTGATG
AATCCGGACG GCAGCATGGC CAAGGGAGAC GATATTGTCC GTTTCGCAGT CCGGCACGAC
CTGCCGGTCA TTACCATAGA GGATATAGTG GCATTGCGCC TGCAAGAGAA AAAAACCCCG
ATTTTGTTGT GA
|
|---|
| Protein sequence | MSVQTTMLLK SDVAVARPEW QRALEAIRAG RPVILLDDSD RENEGDLIVA AERLTVATMA
MLIRECSGIV CLCLTPEHVA RLDLPPMVQQ NESRFGTAFT VSIEAREGVT TGVSAADRVT
TIRAAIASGA RPWDIARPGH IFPLCAHPEG VLGRRGHTEG SVDLARLAGL EPAAVLCELM
NPDGSMAKGD DIVRFAVRHD LPVITIEDIV ALRLQEKKTP ILL
|
|---|
| |