Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1649 |
Symbol | |
ID | 6877629 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 1619308 |
End bp | 1620768 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642789516 |
Product | Pyrrolo-quinoline quinone |
Protein accession | YP_002220078 |
Protein GI | 198283757 |
COG category | [S] Function unknown |
COG ID | [COG1520] FOG: WD40-like repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000205987 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0168641 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAGCG TCACCGTATC TGCGGCTTCC ACCACCATGT CTCAGTTCGA GGGGAATGCG CGACATTTGG CGTTCACCCC GGATAAGATC GGCAACTTCG ATACCTTCAT CAGTCAGCAC ATCATTGCTC CACCATCAGT CGATGGAGGG ACCCTGTTGG TAACGACGGG GAAGGCGGGA CGCCGCCAGG AGGGGCAGGT GCTGCGCGTC GATGCACGGA CAGGCGCCAT TGTATGGCGA ACCTCGTTGA GCAACATTAT CATGACGCAG GCGATCGTGG CGGACCGCGA CGTGATAGTA GGGCTCGGGG GAAAGCGTAT GTTTGCGGTC AACGCAGGCT ATTCCTGCCG TTCCCGATTT CCCCATGCCA TCGTGGCGCT CCAGGCGGCT ACCGGCAAGC CGGTCTGGGA ATACGCCACG CACTGTCAGG ATATGCCGAC GCCTGACTAT GCCCACCATG AAGTTCTAAC CCCTACCGGG GGCGGGCGTT TCATCGCCCT GGACGCCCGC ACGGGGAAGC TGCTTTGGCA GATACACATC GGTGGATGGT CGGCGATGTC TTCTCCGGCC AGAGTGGGTT CGAATCTGTA TTTCGGAACG GACAATCTCT TCACTCGCCA CAACGATTTT TACGATATCG ACTGGCGAAC CCACAAAATT CGCTGGTCGC GGAATTTCGC GCATGCCGTC AATCTTGCGG AAGCATCCCC GGTGGGGCGC GGGAACGCCG TGTTTACGGC GTTCATGCGT AAGGATTCCT ATGATCTGTG GGACATTCTG GTACATCTCT GGAAGCACAC CGCGATGCGT GACTTTGCCT TCGAGGTGGT GAGCCTGGAC GCTGCGACCG GGCGTCTGAT CCATCGAAAA AATATCTATA CCCGTTACCT CTCGCCGCGC GCATGGATTC ATGAGCGTAT CATCAGCAGT GAAATATATT GGAAGAACTG GGCAATAGCA GCACTACGGA AAATGGGCCA CGCCATCCAT CTCCCAGCCC TGTTTTCCAG TATGCGCAGG CACGATCCGA CGCACCCCGG AATCTACGAC CCTCCCCTCA CCGCGTGGCA CCGCATCATT TATGTCGAAC CACGCTTGAC CAAACGGTTA TATGCGTTGG ATGCGCACAC CGAAAGAATC CTCTGGACCT TTCGGACAGG GGCGGATGTC AGTAACCCCA ATATATACCA TGGAGCCCTT TATACGGTGA ATGCTAGGGG AATATTGTAT GTGTTGAATG CGCGAACGGG CAAACTGATA TATACCGAAA GACTCGCAAC CGGCACGGTG GGACCATCCG ATGGTCTGCT CAGTCCGTAT GCCTTTGTCG TGGGAGGCAC CTCCGGGAAC CTGGTCTCTC TGCCTATCGG GCATTTGAAT GGAAGCGCTG GTACCCCTGG AAAATTCTTG CACTTAGGTA CCAAAGCTCG TTCGCTATGT GAAGAAAAAG ACGCAAGCTG A
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Protein sequence | MASVTVSAAS TTMSQFEGNA RHLAFTPDKI GNFDTFISQH IIAPPSVDGG TLLVTTGKAG RRQEGQVLRV DARTGAIVWR TSLSNIIMTQ AIVADRDVIV GLGGKRMFAV NAGYSCRSRF PHAIVALQAA TGKPVWEYAT HCQDMPTPDY AHHEVLTPTG GGRFIALDAR TGKLLWQIHI GGWSAMSSPA RVGSNLYFGT DNLFTRHNDF YDIDWRTHKI RWSRNFAHAV NLAEASPVGR GNAVFTAFMR KDSYDLWDIL VHLWKHTAMR DFAFEVVSLD AATGRLIHRK NIYTRYLSPR AWIHERIISS EIYWKNWAIA ALRKMGHAIH LPALFSSMRR HDPTHPGIYD PPLTAWHRII YVEPRLTKRL YALDAHTERI LWTFRTGADV SNPNIYHGAL YTVNARGILY VLNARTGKLI YTERLATGTV GPSDGLLSPY AFVVGGTSGN LVSLPIGHLN GSAGTPGKFL HLGTKARSLC EEKDAS
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