Gene Lferr_1644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1644 
Symbol 
ID6877624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1614747 
End bp1614995 
Gene Length249 bp 
Protein Length82 aa 
Translation table11 
GC content61% 
IMG OID642789511 
Productexodeoxyribonuclease VII, small subunit 
Protein accessionYP_002220073 
Protein GI198283752 
COG category[L] Replication, recombination and repair 
COG ID[COG1722] Exonuclease VII small subunit 
TIGRFAM ID[TIGR01280] exodeoxyribonuclease VII, small subunit 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000413524 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACGACG AATCGTCCCC CGTGGAAGCC CCCGCCGACT TCGCAAGCAC CCTGGATGCC 
TTGGAAGAGA CCGTTCGCCG CCTGGAAGGG GGGCAGTTGG GTCTGGAAGA CTCTGTCGCC
CTTTTTCAGC GCGGCATCGA GTTGTCCAGG CGTGCCGAGG CGCAGTTGCA GAACGCGCGG
CAAATCGTGG AAACATTGCT CGGAGAGGAC GCGGTTCCTG CTCCGCTTAC TCAGGAAGAA
GACGGATGA
 
Protein sequence
MNDESSPVEA PADFASTLDA LEETVRRLEG GQLGLEDSVA LFQRGIELSR RAEAQLQNAR 
QIVETLLGED AVPAPLTQEE DG