Gene Lferr_1632 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1632 
Symbol 
ID6877612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1598231 
End bp1599355 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content53% 
IMG OID642789499 
Productfatty acid desaturase 
Protein accessionYP_002220061 
Protein GI198283740 
COG category[I] Lipid transport and metabolism 
COG ID[COG3239] Fatty acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000412854 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000182174 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCCACTTA CCTCTTCCAA TGCTGACTTT GAGGCATTGC GCCCCGTCAA GCTTCAAACC 
ATCCGGGACG TGATTCGGCC GGAACGCTAC CAGCGATCAA CAGGCATCGC CCTCGCGTGG
TACATGTTTG ACGCAATTTT CTACCTCTCC GCCATCACCG GCGCCCTTCT CGCCGGACCT
TGGTGGCTCA AGCTGTTATT CGGACTGCTT GCGGGGTCGG CGGTGGCCTC TATGTTCGTC
TGGGCACACG ACGCAGCGCA CGGCGCCCTC TTCCAGAGCA AGCGCACTGC CGAGATCTTG
GGCACCATCT TCATGCTGCC GTCGCTGAAC ATGTACCGCC TCTGGGCCTT TGGGCACAAT
CGCGTGCATC ACGGTTTTAC CAGCCTGAGC ACCATCGACT GGGTATGGCG CCCCTGGACT
CCCCAGGAGT ACAGAAGCAA AACGGTTTGG CAGAAGATGA TCTATCGGTT GGAACGTAGT
CCTTATACTT GCGCCCTGCA CTACTTGTTG CGTATCTGGT GGCCGGGCAT GGTCCGTTTC
AAAGTAGACG CCAAAAACAA AGATCGTTGG CCATTCTTCT ACAGCAAGAT GGTAACGCTG
GTGTTTTTTA TAAGTTTTTC CGCGTTGGCA TACTGGATCT CCGGTCCGAT GGGTATCATT
GCGGCCGTTA TTCTGCCTTT CTTGGTGTTC AACTATTACA TCGCGCTGTT TGTCTTTCTC
CACCACACGC ATCCCAATGT GCCATTTTTC TCGGAAAAGG AGGAATGGAG CCAGAGTATT
GGCCAGCTTT ATTGCAGCAT AATCGTACGT TGCTCCAAGG TCAGCGAGTA CCTGATCCAT
AACATCCTGA TCCATACACC GCACCACGTT GATCCACGGA TACCCTTCTA TCGCCTGAAA
GGGGCTTACG AAGATTTACG TGCAGAGTAC GGCCAGTACA TTCATGAAAC GCGCTTCGGC
TTTTTTGAGA TTCGGCGTAT CTTCAAGGAA TGCAAGTTAT ATGACTACGA GGGAAAATCT
TGGTTGAGTT TCCGGTCCGG CCGTAGCTGG ATTGAGGAGA AGGCTGCGGA CATCGCTGCC
TCCGCTACCT CTTCCGTATA TCAGCCCGGC AAGACCGCAC ACTGA
 
Protein sequence
MPLTSSNADF EALRPVKLQT IRDVIRPERY QRSTGIALAW YMFDAIFYLS AITGALLAGP 
WWLKLLFGLL AGSAVASMFV WAHDAAHGAL FQSKRTAEIL GTIFMLPSLN MYRLWAFGHN
RVHHGFTSLS TIDWVWRPWT PQEYRSKTVW QKMIYRLERS PYTCALHYLL RIWWPGMVRF
KVDAKNKDRW PFFYSKMVTL VFFISFSALA YWISGPMGII AAVILPFLVF NYYIALFVFL
HHTHPNVPFF SEKEEWSQSI GQLYCSIIVR CSKVSEYLIH NILIHTPHHV DPRIPFYRLK
GAYEDLRAEY GQYIHETRFG FFEIRRIFKE CKLYDYEGKS WLSFRSGRSW IEEKAADIAA
SATSSVYQPG KTAH