Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1632 |
Symbol | |
ID | 6877612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 1598231 |
End bp | 1599355 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642789499 |
Product | fatty acid desaturase |
Protein accession | YP_002220061 |
Protein GI | 198283740 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3239] Fatty acid desaturase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000412854 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00000000182174 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCCACTTA CCTCTTCCAA TGCTGACTTT GAGGCATTGC GCCCCGTCAA GCTTCAAACC ATCCGGGACG TGATTCGGCC GGAACGCTAC CAGCGATCAA CAGGCATCGC CCTCGCGTGG TACATGTTTG ACGCAATTTT CTACCTCTCC GCCATCACCG GCGCCCTTCT CGCCGGACCT TGGTGGCTCA AGCTGTTATT CGGACTGCTT GCGGGGTCGG CGGTGGCCTC TATGTTCGTC TGGGCACACG ACGCAGCGCA CGGCGCCCTC TTCCAGAGCA AGCGCACTGC CGAGATCTTG GGCACCATCT TCATGCTGCC GTCGCTGAAC ATGTACCGCC TCTGGGCCTT TGGGCACAAT CGCGTGCATC ACGGTTTTAC CAGCCTGAGC ACCATCGACT GGGTATGGCG CCCCTGGACT CCCCAGGAGT ACAGAAGCAA AACGGTTTGG CAGAAGATGA TCTATCGGTT GGAACGTAGT CCTTATACTT GCGCCCTGCA CTACTTGTTG CGTATCTGGT GGCCGGGCAT GGTCCGTTTC AAAGTAGACG CCAAAAACAA AGATCGTTGG CCATTCTTCT ACAGCAAGAT GGTAACGCTG GTGTTTTTTA TAAGTTTTTC CGCGTTGGCA TACTGGATCT CCGGTCCGAT GGGTATCATT GCGGCCGTTA TTCTGCCTTT CTTGGTGTTC AACTATTACA TCGCGCTGTT TGTCTTTCTC CACCACACGC ATCCCAATGT GCCATTTTTC TCGGAAAAGG AGGAATGGAG CCAGAGTATT GGCCAGCTTT ATTGCAGCAT AATCGTACGT TGCTCCAAGG TCAGCGAGTA CCTGATCCAT AACATCCTGA TCCATACACC GCACCACGTT GATCCACGGA TACCCTTCTA TCGCCTGAAA GGGGCTTACG AAGATTTACG TGCAGAGTAC GGCCAGTACA TTCATGAAAC GCGCTTCGGC TTTTTTGAGA TTCGGCGTAT CTTCAAGGAA TGCAAGTTAT ATGACTACGA GGGAAAATCT TGGTTGAGTT TCCGGTCCGG CCGTAGCTGG ATTGAGGAGA AGGCTGCGGA CATCGCTGCC TCCGCTACCT CTTCCGTATA TCAGCCCGGC AAGACCGCAC ACTGA
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Protein sequence | MPLTSSNADF EALRPVKLQT IRDVIRPERY QRSTGIALAW YMFDAIFYLS AITGALLAGP WWLKLLFGLL AGSAVASMFV WAHDAAHGAL FQSKRTAEIL GTIFMLPSLN MYRLWAFGHN RVHHGFTSLS TIDWVWRPWT PQEYRSKTVW QKMIYRLERS PYTCALHYLL RIWWPGMVRF KVDAKNKDRW PFFYSKMVTL VFFISFSALA YWISGPMGII AAVILPFLVF NYYIALFVFL HHTHPNVPFF SEKEEWSQSI GQLYCSIIVR CSKVSEYLIH NILIHTPHHV DPRIPFYRLK GAYEDLRAEY GQYIHETRFG FFEIRRIFKE CKLYDYEGKS WLSFRSGRSW IEEKAADIAA SATSSVYQPG KTAH
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