| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1626 |
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| Symbol | |
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| ID | 6877606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 1591893 |
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| End bp | 1593749 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642789493 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_002220055 |
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| Protein GI | 198283734 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0729] Outer membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.200512 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000168183 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGCGTTAT GGTTATCCTG GACCACAAAT GAAACGGCAG GAGGTTTTCT GGGTTCGGTC
AGGAAGGATG GAAGCGCGAA ACGCGGTCGT CTGCGTGACC TGCGCCGTGG CCTATGGCTG
ACGGGCTTGG GTGTTTCATT GCTGTACGGT GGAATGGCTA ACGCTGATGA AGTAACTTTC
ATTGTGGAAG GGATCTCCAG ACCCCTGGCA GCGAATCTCG CACATGCTCT CCCCCCTGCG
GTGATCGGAT CCCAGGCGGA CCGTTTGGAA GAAGCAGAAA TGGTGGCCGG TTTGCGCCTT
AAGGATGCGC TTGAAGCCTA TGGTTATTAC GGCGCCACAT GGACGGAGAG CAGTAAAAAC
ATTGCAAAGG GAAAAGTCCT CGTAACCTTC TCCGTCACCC CTGGGCGGCC TGTTCTGGTC
CGCAAAATCG ACCTAAAATC CACCGGTGAT GGATCCAAAC TGCCGGCTTT ACAAAAACTG
TTCTCTCAGT TTCCGCTTCA TAAAGAAGGG GTTCTCAATC AGGTTATTTA TGAGGACTGG
AAGGGGAATG TCCTCTCACT CCTCACCGCG CGCGGTTATG CGCAGGCCAG TTATTCGCGC
CATGAGATTC TTGTGGATCG TGACCAGTTC TGGGCAGATA TTTATTTGTG GCTCAATACC
GGACCACGCT TCCGAGTTGG AGATATTAAT ATCACTGGTG CGGAGCACTA TCCGCGATGG
TTCATTCAGC GCTATATTTC TTTCAAGACA GGAGACTGGT ATTCACCAAA GGCGCTGGCA
GTCACTCAGA GCAATTTGCG CAATGCCGAC CGGTTCTCTG ATATTTCCGT GCATGGCGAT
TTGGGAAAAG CGATAAATAA TGCGATACCT GTTTCAGTTA ACTTGAAAAG CATGCCGGGG
CAACACCTGA AAATAGGCGC CGGATATAGC ACTGATATCG GTCCTAATGC AGCAATTATA
TATGATAATT ATAATGCTTT CGAACAGGCA CAGCATGTTC GCGTTTCCAT TTTGGCGGCG
CAACTGAATC GCAATGCCAG TGTTACCTAT AGCTGGCCGG TCGGTGCGCG CCTGGGATCC
GAATATATTG CGCAAGGCAG TTATCAGAAT CAAAATCTGA CCGCCTATAA TGCTAACGAG
ATCCTTGCCA GCGCTGGTCG GCAGTGGTCA TTGCGCAGCG ATAACAGTCT GAGTAAAGGT
GAAACCATAG AGGCCTTGGT TAATTTTGAG GACGCCAACT ACAATGTGGC TGGACAGTTT
AATACGAGCT TGTATATCTA TCCGTCGCTA CAATATAGCA TACAAAACTT CCGCAATATC
TTGCGCCCCA TAGCCGGCTA TACACTGACG GCCAGGATTG AGGGTGCCAG CAAGGTATGG
GGTAGCGATG CAAATTTTAT CCGCTTTAGC GCTCAGGGAG AATGGCGCAG GCGTTTGGGT
CAGGACTGGG TCCTCGGCAC CCATGCCAAA CTGGGGGCAA TGTGGTTAAC TGGGTCCATT
GGCGAACTGC CACCCAATCT GCGATTTTTC GCAGGTGGGC AAAATAGCCT GCCCGGTTAT
GCCTATCAAT CGCAGGGGCC ATTGGCTGTG AACGGTGAAG TGGAAGGTGG GCGTCTTCTT
GCCGTTGGTG GCTTCGATAT TCAGCGCTTT GTCGCCAAAA ACTGGGCGGT CGTCGCATTT
TATGATGTGG GTAATGCATT CAACAGTTGG TCCAGTTTTC ATGCGCTTCA AGATGTTGGG
CTAGGCGTGC GCTGGTATTC CCCCGTTGGA CCCATACGCT TTGACGTGGC GCACCCACTG
GTTGCCCCGC AAACGCCTGC CGTCCGGGTC GCCTTCTCGG TAGGGTTCAG CTTGTGA
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| Protein sequence | MALWLSWTTN ETAGGFLGSV RKDGSAKRGR LRDLRRGLWL TGLGVSLLYG GMANADEVTF
IVEGISRPLA ANLAHALPPA VIGSQADRLE EAEMVAGLRL KDALEAYGYY GATWTESSKN
IAKGKVLVTF SVTPGRPVLV RKIDLKSTGD GSKLPALQKL FSQFPLHKEG VLNQVIYEDW
KGNVLSLLTA RGYAQASYSR HEILVDRDQF WADIYLWLNT GPRFRVGDIN ITGAEHYPRW
FIQRYISFKT GDWYSPKALA VTQSNLRNAD RFSDISVHGD LGKAINNAIP VSVNLKSMPG
QHLKIGAGYS TDIGPNAAII YDNYNAFEQA QHVRVSILAA QLNRNASVTY SWPVGARLGS
EYIAQGSYQN QNLTAYNANE ILASAGRQWS LRSDNSLSKG ETIEALVNFE DANYNVAGQF
NTSLYIYPSL QYSIQNFRNI LRPIAGYTLT ARIEGASKVW GSDANFIRFS AQGEWRRRLG
QDWVLGTHAK LGAMWLTGSI GELPPNLRFF AGGQNSLPGY AYQSQGPLAV NGEVEGGRLL
AVGGFDIQRF VAKNWAVVAF YDVGNAFNSW SSFHALQDVG LGVRWYSPVG PIRFDVAHPL
VAPQTPAVRV AFSVGFSL
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