| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1625 |
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| Symbol | |
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| ID | 6877605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 1588342 |
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| End bp | 1591896 |
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| Gene Length | 3555 bp |
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| Protein Length | 1184 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642789492 |
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| Product | protein of unknown function DUF490 |
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| Protein accession | YP_002220054 |
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| Protein GI | 198283733 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2911] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0000031551 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGATACGCA TCCGCCACGG CATTATTGCC GGTGTGTTGC TGGTCCTGAT TACGCTGGCC
ACCGTCCTAG TCTGGCTGCT CACTACCAGC CACGGTGCAC AGTGGGCGTT AGCGCAGGTC
CCAAACTTAC AGGTCAAACA GGTAAAAGGC TCGCTTATCG GCAAGATGCG GCTTTCCGGT
ATTTCCTGGC ATGGTGCGGA CATGCGCTTT CGTGCGCGAT CTTTGCAGTG GCACTTGCAT
CCTGCCCATT TGCTCCGGGG AGAAATCGAC TTTGCCGATC TCCAGCTTCA CCAAGCCGAT
TTGCACCTGC CGGAGCCCTC TGATAAACCC AGCCCCATTC ATTTGCGCTG GCCCGCATTG
CCTCTGTGGA CCCGTCTCAT CGACCTGAAA CTGAGCCCGG TTACTTGTAC GAACCTGCGC
ATATGGCAAG GAACGCAGAA GCCCTTCGTC CTCTCCCGGG CGACATTTTC CGATCTGGCC
TGGCGGCGTG GCAATCTGCA CATCAAAAAC CTGTCGGCGC AGATACCCCA GGGCAGACTC
CAGCTTACGG CAGACCTGCA AATGGGAGAG CGCGGGCTGC AAAGCCTGGG TGTATGGAGA
CAAGGCAGTG CCACCAACCC GTTGACTATA AGTTGGGAAA CACACTGGCA TGGCATTTCG
GCCCAGACAT TTGGCGGCCC CCTGGATATT CAGGTACAAG AAAACAAGCA ACTGACGACT
TTGAGCGGTA TGACGCAGAT CTCTCCACAG CAGATTTTGC TCCAGTCACT ACAGCTTAGT
AATCCTGCGC TCCAGAAACC CGCACAGGGG CATTGGCGTC TTGATTTGCC CGACAATACT
GCAGGGAGTT ACCAGATCAG TGGCGGCTTC GAGCAGATCC TGGCAAAAGC GCAGCCCAGC
ACGTTACCGG TAGGCGCATT GGCCGTCAGT TTGACTTTGC GGGGGAACAC TCAGCGTTAT
CAAGGACAAC TGGCGCTGCG CGGTGATCCC AGATTCGGCG GTATTCAGGG CAATGTGAAC
GGCAATCGCC AAAACCTGCA ATACCATTAT GCCGGCAAGC TGCTGGGCGC AGATCTGCTG
CCTTCGGTGC TGGCCGTCCG GTGGCGGCCG CAACTCACCG TCACCGGGCA AATTCGGGTC
AGGGGCCTGC AAACACAGCA CATTATGGCT CAGATACCAG GCAATTTTTC CGGAGACCTC
AGCGTCAACG CCACTCAAAT TTCCAAAGTC ATCACGGGTG ATGTGCGGCT GCAATTGCTG
CCTAGCCAGC TTTACCGCCA AACCTTGCAG GGCGAGGCGT TGGTGCACTT CGCAGGGAGC
GCGTGGGATC TGCAAAAGGC ACAGTTTTTT GGTCCGGGTG TAAGCCTGGG CGCCCAAGGT
AATTTACAAC AACGTCTGCA TTTCGTCCTC AACGTGGCGC AGTGGCAGGG CTTGCTTCCC
GGTGCCCAAG GTAAGAGTCT GCTTCAGGGT TGGGTGGCGC GGCCTCAGGC GCAGTGGACT
GGAGAAATCC AAGGCACAGG ACAAGGGCTT GCCTATCATG GTGTAAAGAT CAATACACTG
AAAACACGGG CCGAATTCCG GGCCGCGAAC GCCTTGCAGG CTATGATCAA TATAAAGGGA
CTGGCATACG CTGGCCACCG CATTGATCTG CAGGTCCATG CGCAAGGGCC ATTAACACGT
TTTACGCTGG GACTGGACGC GCAATGGCCG CAAAGCCGCC TCTCCGTCAT GGGGTTGGTG
TCTCATCAGG CCAATGCGTG GGGACTGCGA TTGGAGAAGA CCATACTGAC CAGCATCCCT
CTGGGAAACT GGCAGTTACT CCACCCAGCC ACTCTGCAAT GGGTCAATGG TGCTGCATCG
CTCAGCAAAA TGGCTTTCGC CGATGCGCAT GCGGCTCGGA TTACCACGCA AGGTCACTAC
AATCCCGCCA CCAATCAGGC CGATTTGGGG CTCGATTTGC AATCTCTACC TCTGGATTTT
TTCGCGCAGG CGGAGGATGC ATCGCTCCAT GGTTTTTTAA ATGCACACCT GCAAGCGCAG
TGTCACGGAG TTTGCCAGGC GGAAGGACAT TGGAATTTTC AGAAAACCCA ATTGCAATGG
CGGCAGGCAG GCACGTCGCA TACGCTCTCT CTGCAACGGT TTACCGGTCA ACTCCGTTGG
TTGCCAAAAG ACCTCTCGCT TGCTGCTGAC CTTGGTCTTG CCAATGACTG GGGTAATGCC
CAGATGACCC TGCACAGCCC CGCGACACTC GTTCTGCCCT GGCATTGGGA CGCCAATGTC
CCAATACAAG GGGCTATAAA GGCGCATGTG GGTGCACCAC TTTTTGCCGC CCTCCCCGTC
GGGAATTTGC GGATTCGGCC GCAAGGTAAA GGGACTATAG ACGCACAGGT TCTGGGTACT
TGGGCGCATC CGCAGTGGAC AGGTACAGCA CAACTCCAGG GTCTGGGCTT TTTCGTCCCG
CAGGCGGGTT TGGAGGTTCG TGACGTGGGC GCCCAACTCG TGGGAGATGG AAAAGAGTTG
CGAATCAATC AACTGCAAGC CAGCTCCGGC GCTGGCCAAA TATCCGGGAC AGGCATCGTC
CAATTTCAGC AGGCGAATGA TTTTACGCTC CACATCACTG GGAAGAACTT CACGGCGCTC
AATCTGCCGC AGGTACAAGC TGCGATCAGC CCCGACCTGA GCGTTTCCGG AAACCTAAAG
AAAATCGACG TGCAGGGCAA TATACACACC GACCGTCTGC GTATATTGGG TACAGATTTC
AGCGGACCCA AGCCCTCAGG CGACGTCGTT TTCGTGAAAA ATGAGCACAA AAGCAGCGGC
CCTGCCCTGG GTGTCAATGT GCATGTAACC CTCGGGGACG ATGCGAGGGT TATCATCAGC
GGGTTGCGTG CCCGGTTGGT CGGTGACCTT GCCGTAGACA TGCATGACGG CCAAAGTCCG
CAGGTTAATG GCACACTGCG CATGGTGGAT GGCCATTATG CGATTTATGG GCACACCCTC
ACCTTCCAGC GTGGTTCCAT CATTTTCCGC GGTGCCGCGA ACCAAGCCAA CCTGGACGTG
CTGGCGGTAC GCACCATCAA AGGCTCCTCT AGCTTCGCCG TGGACAACAC CCCCGTAGAG
GCTGGCGTAC AAGTCACCGG TACACTGCAA GTGCCCCAGG TAGCGCTCTA CTCCAAACCT
TCCATGTCGC AAACGGATAT CCTCTCCTAT CTCGTGCTGG GTACACCGAG CAGTGGTCTC
ACCAGTCAGA ATGCGCTGCT TTCCGCCGCT GCGGGAACAC TCTTTTCTGC AAGCCGTGCC
GCACTGTTCG GCAATAGCCT GGATAGCAGT GGCATTGATG TAGGTGTAAG CTCCGAAGGT
AACTCGGGTC TGGCGGGTGC CATGGTGACC ATGGGTCATT ATCTTACCCC CGATCTTTAT
CTCAGTGTCG GACAATCCGT ACTGGGCAGC GGTACTGTAG CACGACTGCG TTACCGGATT
TCCCGCCATA TTGAGGTTCA GACGGAGAGC GGGACCCAGA ATGGCGCCAA CATTTTTTAC
CGTATCGACT TTTAA
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| Protein sequence | MIRIRHGIIA GVLLVLITLA TVLVWLLTTS HGAQWALAQV PNLQVKQVKG SLIGKMRLSG
ISWHGADMRF RARSLQWHLH PAHLLRGEID FADLQLHQAD LHLPEPSDKP SPIHLRWPAL
PLWTRLIDLK LSPVTCTNLR IWQGTQKPFV LSRATFSDLA WRRGNLHIKN LSAQIPQGRL
QLTADLQMGE RGLQSLGVWR QGSATNPLTI SWETHWHGIS AQTFGGPLDI QVQENKQLTT
LSGMTQISPQ QILLQSLQLS NPALQKPAQG HWRLDLPDNT AGSYQISGGF EQILAKAQPS
TLPVGALAVS LTLRGNTQRY QGQLALRGDP RFGGIQGNVN GNRQNLQYHY AGKLLGADLL
PSVLAVRWRP QLTVTGQIRV RGLQTQHIMA QIPGNFSGDL SVNATQISKV ITGDVRLQLL
PSQLYRQTLQ GEALVHFAGS AWDLQKAQFF GPGVSLGAQG NLQQRLHFVL NVAQWQGLLP
GAQGKSLLQG WVARPQAQWT GEIQGTGQGL AYHGVKINTL KTRAEFRAAN ALQAMINIKG
LAYAGHRIDL QVHAQGPLTR FTLGLDAQWP QSRLSVMGLV SHQANAWGLR LEKTILTSIP
LGNWQLLHPA TLQWVNGAAS LSKMAFADAH AARITTQGHY NPATNQADLG LDLQSLPLDF
FAQAEDASLH GFLNAHLQAQ CHGVCQAEGH WNFQKTQLQW RQAGTSHTLS LQRFTGQLRW
LPKDLSLAAD LGLANDWGNA QMTLHSPATL VLPWHWDANV PIQGAIKAHV GAPLFAALPV
GNLRIRPQGK GTIDAQVLGT WAHPQWTGTA QLQGLGFFVP QAGLEVRDVG AQLVGDGKEL
RINQLQASSG AGQISGTGIV QFQQANDFTL HITGKNFTAL NLPQVQAAIS PDLSVSGNLK
KIDVQGNIHT DRLRILGTDF SGPKPSGDVV FVKNEHKSSG PALGVNVHVT LGDDARVIIS
GLRARLVGDL AVDMHDGQSP QVNGTLRMVD GHYAIYGHTL TFQRGSIIFR GAANQANLDV
LAVRTIKGSS SFAVDNTPVE AGVQVTGTLQ VPQVALYSKP SMSQTDILSY LVLGTPSSGL
TSQNALLSAA AGTLFSASRA ALFGNSLDSS GIDVGVSSEG NSGLAGAMVT MGHYLTPDLY
LSVGQSVLGS GTVARLRYRI SRHIEVQTES GTQNGANIFY RIDF
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