Gene Lferr_1614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1614 
Symbol 
ID6877592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1574751 
End bp1575515 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content57% 
IMG OID642789479 
ProductHemerythrin HHE cation binding domain protein 
Protein accessionYP_002220043 
Protein GI198283722 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00121654 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCAATTC AACCAGCAAT ATCGCCCGCA CCCACAGTCT CGGCCCAGAA CATGATCGAC 
GTATGTGGCA TGCCTTACGC GGTGGCGCAA CCGCTGATTT ACGCCGCCAC GACCCGCCTG
GCAATAGGGC AGCGGGTACG GGTATTGGCG GACACGGATC CCAGTGCCAT GATGCGGGCA
GTGGCTTTTC AGTTGCGTGA CGCCATCTCC TGGCGTTTTG AAACGGATGG CAAGCTCTGG
CAGATAGACA TACGACCCCG CGCCGAAGCG GAAGCCAAGG ATGTGGTAGA CCTACTGACC
TGGGATCACT ACCGACTGGA CCGCCAGTTT GCTGACATTT TGGCTGCCGC CAACCAAAAT
CGGATCACAG ATGCAGAAAC CCTCTTCAGC GATTACTGGA TCGGTCTCCG CCGCCACGTC
CATCTGGAAA ACAATATCCT CGGTCCGACT TTGGGTGGCG GAGAGATAGA AGGTCCACTT
GCGGACATGC TCCTTGAACA CGACAGCATC ATCATCCAGT CCAAGCTGGT GGAAGAGACG
TTGATGGAAA AGGATTATGG TATGTTGCCC GCCATTTGCG CAGTGCTATC CGGATCCCTG
GCCAAACATG AAAACCGCGA AGAAAACACC CTCTTCCCTA TCTGGCAAAC CACCGACAAT
AGCGACCGGG GTCGCGCTGC CGAGTTCCTG GCCCTCTCCA AAGAGGTGCT GGCGGGCGCA
GAGGATCAGC AAGTCAACGG GATTTTCCCC GGTTGCGCCC GGTAA
 
Protein sequence
MSIQPAISPA PTVSAQNMID VCGMPYAVAQ PLIYAATTRL AIGQRVRVLA DTDPSAMMRA 
VAFQLRDAIS WRFETDGKLW QIDIRPRAEA EAKDVVDLLT WDHYRLDRQF ADILAAANQN
RITDAETLFS DYWIGLRRHV HLENNILGPT LGGGEIEGPL ADMLLEHDSI IIQSKLVEET
LMEKDYGMLP AICAVLSGSL AKHENREENT LFPIWQTTDN SDRGRAAEFL ALSKEVLAGA
EDQQVNGIFP GCAR