Gene Lferr_1611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1611 
Symbol 
ID6877589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1571650 
End bp1572738 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content56% 
IMG OID642789476 
Productphosphate ABC transporter, periplasmic phosphate-binding protein 
Protein accessionYP_002220040 
Protein GI198283719 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0226] ABC-type phosphate transport system, periplasmic component 
TIGRFAM ID[TIGR00975] phosphate ABC transporter, phosphate-binding protein 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00319351 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGCATC GCTTGAAGAA AGAAGTAACA CGTAGTGTCA AAGGTGCCGT AATTCTGTCC 
GCGCTGAGCC TTTCTGCCCT GTATGCCCTG CCTGCTTCGG CGGCTCCGAC CATCTCGCTG
CTGGAAACCG GCTCCACCCT GCTGTACCCG CTCTTCAATC TGTGGGTTCC TGTGTACACC
AAGATGAACC CCGGTATTCA GATCACCACT CAGGGCACGG GCAGCGGTAC CGGCATCGCT
GAGGCGATCT CTGGCGTGGC CCAGATTGGC GCTTCTGACG CCTACATGAG TGATGCTCAG
ATCAAGCAGC ATCCCAATAT CCTGAACATC CCGCTGGCCA TCTCCATTCA AATGATCAAT
TACAACGTTC CCGGTCTGAA TAACGTGCAT CTGAAGCTGT CCGGTCCGGT GCTCGCGGGC
ATCTACTCCG GCAAGATCAC CAACTGGGAT GACGCGGCCA TTGCCAAGCT GAATCCTGGC
ATAAAGCTGC CCAACCACAA GATTATTCCG GTGCATCGTA CCGATGGGTC CGGTGACACC
TTCATTTTCA CCACCTATCT GTCTGATACA ACCCCTGCAT GGAGCAATAG CGTGGGTTAC
AGTACGACGG TGAGCTGGCC AGCAGTCCCC GGTGGCATTG GTGCGGAAGG TAACCCCGGC
ATGGTGCAGG CCCTGAAAAC GACACCTTAC GGCATCGCCT ATATCGGCAT TAGTTGGAAG
AAACCGGTGG AAGAGGCCCA TTTGGGAATG GCCATGCTGG AGAACCGCGC CGGCAAGTTC
GTACTGCCGA CCGTGGCGAA CGCCAAGGCT GCGGCGGGTG AGATGGTCAA AAAGACCCCG
GCTGACGAGC GGATCAGTCT GGTCTACGCC CCAGGCGCCA GTTCCTACCC CATCATCAAC
TACGAATATG CGATCGTCAG CAAGACGCAG CCCAATGCCG AAGTGGCTAC CGCCATGCGT
AAGTTCCTGA ACTGGGCTAT TGATCCGAAG GGTGGTAATG CGCCACACTT CATTACCGCG
GTGAACTTTG TACCACTACC CGATAGCGCT GCGAAGCTTT CCCGCAAGCA GATCGCGGAA
ATTCAGTAA
 
Protein sequence
MLHRLKKEVT RSVKGAVILS ALSLSALYAL PASAAPTISL LETGSTLLYP LFNLWVPVYT 
KMNPGIQITT QGTGSGTGIA EAISGVAQIG ASDAYMSDAQ IKQHPNILNI PLAISIQMIN
YNVPGLNNVH LKLSGPVLAG IYSGKITNWD DAAIAKLNPG IKLPNHKIIP VHRTDGSGDT
FIFTTYLSDT TPAWSNSVGY STTVSWPAVP GGIGAEGNPG MVQALKTTPY GIAYIGISWK
KPVEEAHLGM AMLENRAGKF VLPTVANAKA AAGEMVKKTP ADERISLVYA PGASSYPIIN
YEYAIVSKTQ PNAEVATAMR KFLNWAIDPK GGNAPHFITA VNFVPLPDSA AKLSRKQIAE
IQ