Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1601 |
Symbol | ndk |
ID | 6877579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 1562122 |
End bp | 1562547 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642789466 |
Product | nucleoside diphosphate kinase |
Protein accession | YP_002220030 |
Protein GI | 198283709 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0105] Nucleoside diphosphate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.144621 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGTTG AGCGCACCCT TTCCATCATC AAACCCGATG CCGTTCAGAA AAATGCCATC GGTGCCATTC TTGGTCGCTT CGAGAAGGCG GGGCTGCGCA TCGCAGCCGC CAAGATGTTG CACCTCAGTC GCGATGACGC GGGTGGGTTT TATGCGGTAC ACCAGGCCCG GCCTTTTTAC GGCGAGTTGT GCGACTTCAT GAGCAGCGGT CCGGTATTGG TCACGGTGCT GGAGGGTGAG GGTGCCATCG CCAAAAACCG TGATCTGATG GGCGCTACCA ACCCCAAGGA TGCCGCTGCA GGAACGATTC GTGCGGACTT TGCCGACAGT ATTGATGCCA ACGCCGTGCA TGGTTCAGAC AGTGCCGAGA CTGCGGCATG GGAAATCAGT TACTTTTTTG GTCAGCGGGA GATTTTTGCG CACTGA
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Protein sequence | MAVERTLSII KPDAVQKNAI GAILGRFEKA GLRIAAAKML HLSRDDAGGF YAVHQARPFY GELCDFMSSG PVLVTVLEGE GAIAKNRDLM GATNPKDAAA GTIRADFADS IDANAVHGSD SAETAAWEIS YFFGQREIFA H
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