| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1600 |
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| Symbol | |
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| ID | 6877578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 1561015 |
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| End bp | 1561962 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642789465 |
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| Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
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| Protein accession | YP_002220029 |
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| Protein GI | 198283708 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
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| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.173011 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCCTG CTATTTTTCT GATGGGTCCG ACGGCCAGCG GCAAGACCGA ACTGGCCGTA
AGACTTGCCG ATGCGTTGCC CATAGACATT ATCAGCGTCG ATTCGTTGCT GGTATATCGT
CATTTCGATA TCGGCAGCGC CAAACCCAGC CTTGCCCTGC GCCAGCAATA TCCCCACGCG
CTGGTCGACA TCCGGGAGCC CGACGAGCCC TATTCGGCGG GCCTGTTTCG GGAAGATGCC
CTGCACTGTA TTGCTCTGGC GCGGGAACGC GGCCGCATCC CGTTGCTGGT CGGCGGCACG
GGCCTGTATT TTCGCGCGCT GGAGTGCGGT ATTGATACCT TGCCCCCCGC CAATCCCGCC
TTGCGCCAGA GTCTGATGGC GTTAGCAGAG ACGGCGGGAT GGCCCGCACT ACACCAGCGC
CTCGCGACCC TGGATCCGGA GGCCGCCGCG GGTATCGCCC CCCATGACCG GCAACGCATT
CAACGCGCCC TGGAAATCAT CCTCGGTTCG GGGCAGACGA TCAGCGGGGC ACGTCACTGG
CAAGGTACAT TCCCCGGTCC GCTCTACAAA ATCATCCTGC GTCCGCCTAG AAGCTGGTTA
CATCAGCGTA TCACGCAGCG CTTTGACGTC ATGCTGAACG AGGGATTTCT GGACGAAATC
GCCGACCTGA GCGCGCGTCA CTACGCGCCC GAGTTACCCG CCATGCGCGC CGTGGGTTAC
CGCCAATACT TCACCTGGCA TGACGGCCTC TGTAGCGCCG CAGAGGCTTA CCAAGCCGCA
CTGGCGGCGA CCCGCCAACT GGCCAAGCGT CAGGATACCT GGTTTAAGAG GGAATCAGCG
CATTATTATC TTGATCCATC CCGCGACGAC GCATCATCCC TGCTATTGCA GATGGCCACC
CGACCCCGGC AGGGCGAGGT GCATTCCATC GGATGGGACA ACGGGTGA
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| Protein sequence | MIPAIFLMGP TASGKTELAV RLADALPIDI ISVDSLLVYR HFDIGSAKPS LALRQQYPHA
LVDIREPDEP YSAGLFREDA LHCIALARER GRIPLLVGGT GLYFRALECG IDTLPPANPA
LRQSLMALAE TAGWPALHQR LATLDPEAAA GIAPHDRQRI QRALEIILGS GQTISGARHW
QGTFPGPLYK IILRPPRSWL HQRITQRFDV MLNEGFLDEI ADLSARHYAP ELPAMRAVGY
RQYFTWHDGL CSAAEAYQAA LAATRQLAKR QDTWFKRESA HYYLDPSRDD ASSLLLQMAT
RPRQGEVHSI GWDNG
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