Gene Lferr_1597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1597 
Symbol 
ID6877575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1558288 
End bp1558743 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content57% 
IMG OID642789462 
ProductCBS domain containing membrane protein 
Protein accessionYP_002220026 
Protein GI198283705 
COG category[T] Signal transduction mechanisms 
COG ID[COG3448] CBS-domain-containing membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.105679 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGG CCCAAGATAT CATGAACCGC GAAGTTGTTA CGGTGCTGGC CGATGATCCG 
GTCGATAAAG TGGGAGATGT GCTCCTCAGT TCCGGGCACC ACAGCCTGCC TGTGGTGAAC
AGCGAGGATC ATCTGGTCGG AATGATCGGC GAACGGGATC TGATCGACGC CCACCGCAAG
GTGCATCTGC CGACCATGCT TACTATCCTG GATGGTCTGA TCCCTCTGGG CGGTATGCAT
GAATACGAGG AAGAGCTACG CAAAGTCACG GCGGTGACCG CCGGTCAGTT GGCGAGCTCC
CACGTCATTA CCGCCGCCCC CGATGAAGAT ACGGACGCGG TGGCCGAGAA GTTGCTGCGC
AAGGATGTAC ATGCCGTGCC GGTGGTCGAT AACAGCGGTT TATTGCTGGG TATCATCAGT
CGCTCGGATA TTCTTCAGCA TCTGCTAAAA CCCTGA
 
Protein sequence
MKTAQDIMNR EVVTVLADDP VDKVGDVLLS SGHHSLPVVN SEDHLVGMIG ERDLIDAHRK 
VHLPTMLTIL DGLIPLGGMH EYEEELRKVT AVTAGQLASS HVITAAPDED TDAVAEKLLR
KDVHAVPVVD NSGLLLGIIS RSDILQHLLK P