Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1591 |
Symbol | |
ID | 6877569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 1552154 |
End bp | 1553872 |
Gene Length | 1719 bp |
Protein Length | 572 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642789456 |
Product | DNA polymerase III, subunits gamma and tau |
Protein accession | YP_002220020 |
Protein GI | 198283699 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit [TIGR02397] DNA polymerase III, subunit gamma and tau |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.382177 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.054959 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCCT ATCTCGCGCT GGCCCGCCGC TGGCGACCCC AACATTTTGA CGATTTTGTC GGGCAGGAGG CCGTCGTCTC CGCCTTGCGC CATGCCCTGG ATTCCGGCCG CATCCATCAT GCTTTTCTGT TCACCGGCAC ACGGGGCGTC GGCAAGACGA CTCTGGCGCG GCTGCTCGCC AAGTGTCTGA ACTGCGAGCG AGGCGTGAGC AGCAACCCCT GCGGAGAGTG CAGCGCCTGC CGCAGTATTG CTGCAGGGAA CTTCGTGGAT CTGCTGGAGG TGGACGCGGC AAGCCGTACC CGGGTGGATG AGACCCGCGA CCTTCTGGAC AATGTCCAGT ATGCGCCTAC GGCTGGTCGC TACAAGGCGT ACCTCATTGA CGAGGTGCAT ATGTTATCTG CGCACAGCTT CAATGCGCTG CTGAAAACCT TGGAAGAACC GCCGGAACAT GTCAAATTTC TGCTGGCGAC TACGGACCCA CAGAAGCTGC CGATAACCGT GCTCTCCCGC TGCCTGCAGT TTAATTTACG TCGCCTGGAT GTTCCCCAGA TTCAGGGAAG ATTGCGGCAG ATCATGTCGT TGGAACAGGT GCCGGCGGAG GACGCCGCCC TGCAGATACT ATCGCGCGCT GCCGACGGGA GTCTGCGTGA CGCCTTGAGT CTGCTGGATC AGGCTATTGT CCACGGTGGT GGCGCGGTGC GGCGCGACGG CGTGCTCGCG ATGCTGGGGC GCAGCGGCGA TGACGCGGTG CTGGGTCTGA TCGCCGCGCT GGTGGACCGA GATGCTGCAC AGGTATTCGC CATAGTGGGT GATCATCTGG CGCGGGGCAT GGACGGGCCC GGCCTGCTGG ACCTGGTCAT AGAAGGCCTG CATCGCATCG CTCTGGCGCA ATTTCTTCCA GCCGATCCGG ATGACGATGG CGCCGAGGCG GTCGTGCATC TGCGCGGGAG AATCAGCCCG CTTACCCTGC AGTCCTGGTA TTTTTTGCTC CTTTCGGCAC GACGTGACTT TGCGCTTTAT CCAGATGATC GCATGGCGCT GGAGATGGCC TTTCTGCGGG TGTTGAGCTT TTCCGGTTCA GCATCGCCCG ACTCGCCGCC AGCGGCCCTC CCGGGCGGGG AAAACCGGCA TCCTGGCGAG TCACTTCCCC CGACGCGCGA ATTCGTTATG CCCGAGGCAA CTTCACCGCT ATCGGATCAT TCGGTTCCCC TGCTCTCCAT CCGTTCACGG GATGAAGTCC GGGAGCCGTC GCCGGTAGCG ACGTCCGGTC AGCGCGATGC GGATGCCGGG ACCGCGCCAG CAGCAGACTG GCGTCGCGTA CTGGCATCGC TGGCGGTGTC GCCGATGATT GCCGAGTACC TGCGCTACGG ACAAGCCCTG CGCTGCGATC CGGAGGCGGT GGAGTTGGCC GTGGAGCCCA ATTATTTGCC GTTCCTTCTC AAGACCGAGG CCCGCCGGGC GTTACATCAG GCGCTTACGG CATATTACGG CCGGGAGCCC AGGCTCAGCA TTGTTGCTCT CACCATAGAG ACCGGGGTGG GCAGCCTGGT GCAGGAAGAC CGGGCGCAGC TGGCGTCCCG GCAAGCTGCA GCAGAGGCAC GTGTGGCCGC GGATCCGCGC ATCGGCGCGT TCCTCGAAGC CCTGGATGCC CGCGTAGAAT CCATTGAAAT CGTGGCGGCA TCCTCAAACG ATATGCCGTC AGCTCACAAT GAAACGTAA
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Protein sequence | MSAYLALARR WRPQHFDDFV GQEAVVSALR HALDSGRIHH AFLFTGTRGV GKTTLARLLA KCLNCERGVS SNPCGECSAC RSIAAGNFVD LLEVDAASRT RVDETRDLLD NVQYAPTAGR YKAYLIDEVH MLSAHSFNAL LKTLEEPPEH VKFLLATTDP QKLPITVLSR CLQFNLRRLD VPQIQGRLRQ IMSLEQVPAE DAALQILSRA ADGSLRDALS LLDQAIVHGG GAVRRDGVLA MLGRSGDDAV LGLIAALVDR DAAQVFAIVG DHLARGMDGP GLLDLVIEGL HRIALAQFLP ADPDDDGAEA VVHLRGRISP LTLQSWYFLL LSARRDFALY PDDRMALEMA FLRVLSFSGS ASPDSPPAAL PGGENRHPGE SLPPTREFVM PEATSPLSDH SVPLLSIRSR DEVREPSPVA TSGQRDADAG TAPAADWRRV LASLAVSPMI AEYLRYGQAL RCDPEAVELA VEPNYLPFLL KTEARRALHQ ALTAYYGREP RLSIVALTIE TGVGSLVQED RAQLASRQAA AEARVAADPR IGAFLEALDA RVESIEIVAA SSNDMPSAHN ET
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