Gene Lferr_1582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1582 
Symbol 
ID6877558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1544657 
End bp1545592 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content62% 
IMG OID642789446 
Productmalonyl CoA-acyl carrier protein transacylase 
Protein accessionYP_002220011 
Protein GI198283690 
COG category[I] Lipid transport and metabolism 
COG ID[COG0331] (acyl-carrier-protein) S-malonyltransferase 
TIGRFAM ID[TIGR00128] malonyl CoA-acyl carrier protein transacylase
[TIGR03131] malonate decarboxylase, epsilon subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.317143 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0477727 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCACGGCT CTATCGCCTT TGTTTTTCCG GGTCAGGGTT CGCAGTCTTT GAATATGCTG 
GCCGACCTGG CTAACAGTCA TCCGTTGGTC AAAGAGGTTT TTGAAGAAGC TTCCGCGCAG
TTGGGCGAGG ACCTGTGGCG GCTCACGCAG GAGGGGCCCA CCGAAAAACT GAGCCAGACC
CGCTGGACGC AGCCGGTGAT GCTGACTGCC GGATATGCCG TATATCGGGT ATGGGAAGAG
GAAGGCGGCA TCTTTCCCGA TTTTGTCGCC GGGCATTCCC TGGGAGAATA TACCGCTCTG
GTGGTTGCGG ATGCGGTGGA TTTTGTGGAC GCTGTACGCC TGGTCGCGGA ACGAGGCCGC
CTGATGCAGG AAGCGGTGCC GGAGGGGGTG GGTGCCATGG CAGCCATCAT CGGCCTCGGC
GACGATGAGG TGAAACAGCT CTGTGCTCAG GAGGCAAGGG GTGAAGTGCT GGCTGCGGCC
AATTTCAACG CGCCGGGACA GGTGGTGGCT GCAGGTCATC AGGCGGCCGT CGAGCGGCTG
GTGGAGTCGG CACGTGCGGC CGGGGCCAAA CGTGTTGTCC TGCTTCCGGT CAGCGTGCCC
AGTCATTGCA GCCTGATGGA GCCGGCCGCT GAACGTTTCC AGTCTGCGCT GGAAGCCGTG
CAGTTCCGTA GCCCTAGGGC GATGGTGGTA CATAACGCCG ATGTGCAAAG CCACAACACG
CCAGACTCCA TCCGTGCCGT ACTTGCCAGG CAGTTATATT CGCCGGTGCG CTGGACGGAC
ACGATTCGCC ACCTCGCCCG GCAGGGAGCC ATGACCTTTG TGGAAATGGG CCCGGGGCGC
GTACTGTCGG GCCTGGGGAA ACGTATAGAG CCCAGCCTGA CCATGCTTCA CGTCGAAGAT
GGCAAAAGCC TCAAGGCTGC CCTGGAGGTG ATCTGA
 
Protein sequence
MHGSIAFVFP GQGSQSLNML ADLANSHPLV KEVFEEASAQ LGEDLWRLTQ EGPTEKLSQT 
RWTQPVMLTA GYAVYRVWEE EGGIFPDFVA GHSLGEYTAL VVADAVDFVD AVRLVAERGR
LMQEAVPEGV GAMAAIIGLG DDEVKQLCAQ EARGEVLAAA NFNAPGQVVA AGHQAAVERL
VESARAAGAK RVVLLPVSVP SHCSLMEPAA ERFQSALEAV QFRSPRAMVV HNADVQSHNT
PDSIRAVLAR QLYSPVRWTD TIRHLARQGA MTFVEMGPGR VLSGLGKRIE PSLTMLHVED
GKSLKAALEV I