Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1580 |
Symbol | |
ID | 6877556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 1542652 |
End bp | 1543677 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642789444 |
Product | fatty acid/phospholipid synthesis protein PlsX |
Protein accession | YP_002220009 |
Protein GI | 198283688 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0416] Fatty acid/phospholipid biosynthesis enzyme |
TIGRFAM ID | [TIGR00182] fatty acid/phospholipid synthesis protein PlsX |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.152693 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0141815 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCATA TTGCGGTAGA TGCCATGAGT GGCGATTCCG GCCCGTCGAC AGTGGTGCTT GCCATCCGTG ATCTGCTCGA GGATCACCCC GATGTCATAT TTCACCTGGT CGGTGATACG GTTTCCCTTC AGACGGAGCT GGAGAAAGCA CACCTCCACG GATCGGATCA GGTCGTCGTG CACCACGCCA GCCAGGTGGT GGCAATGGAT GAGACGCCGT CCCAGGCCCT GAGGGGCAAA AGGGACTCGT CTATGCATGT CGCCATCAGT CTGGTGCGGG AAGGGCATGC CGATGCTGTA GTCAGCGCAG GCAACACCGG TGCCCTTATG GCACTTGGAA AAGTGTTTCT TCGCACCATT CCCGGAATTG ACCGGCCAGC CATTGCCGCT TTTCTGCCGA CGACCACAGG GCGTTTCCTC GCACTGGATC TGGGTGCAAA TGTGGATTGT CGCCCGGAAC ATCTCCTGCA GTTCGCGGTA ATGGGCTCGA TACTCGCTGA GCGGGTCATG GGTGTGACCA AGCCCCGCGT CGCCCTGCTC AACATCGGCT CTGAAGAGAT CAAGGGCAAT GAGCAGGTCA AAGAGGCGGC ACTTCTGTTG CGTGCCGCCA GGCTGAATTT CATCGGCAAT GTAGAAGGTT CAGATATTTA CAAGGGAGTC GCGGATGTGG TGGTTTGTGA CGGCTTCGTG GGTAATGTGG CGCTCAAGAC CTCAGAGGGA CTGGCAACGA TGATCAGTCA CGAACTGCGC GCCAGCTATA CCCATGGCTG GTATGGGCGC ATTGCTTATC TGATCAATCG TCCCATTCTG CAACGCCTGC GTCGCCGCCT GGATTCCCGT CAATACAACG GCGCCACGCT GCTGGGATTG AACGGGATCG TCATCAAGAG CCACGGAAAT GCGGATCGTT TTGCCTTTGC CTGCGCAGTG AAAGTGGCGA TCACTGAGGC CAAACACCGC CTGACCCTGC GTATTGCGGA AGTGATCCAG GAGAATCTCG ATCCGGCGGT GCGAAACAGC GCGTGA
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Protein sequence | MPHIAVDAMS GDSGPSTVVL AIRDLLEDHP DVIFHLVGDT VSLQTELEKA HLHGSDQVVV HHASQVVAMD ETPSQALRGK RDSSMHVAIS LVREGHADAV VSAGNTGALM ALGKVFLRTI PGIDRPAIAA FLPTTTGRFL ALDLGANVDC RPEHLLQFAV MGSILAERVM GVTKPRVALL NIGSEEIKGN EQVKEAALLL RAARLNFIGN VEGSDIYKGV ADVVVCDGFV GNVALKTSEG LATMISHELR ASYTHGWYGR IAYLINRPIL QRLRRRLDSR QYNGATLLGL NGIVIKSHGN ADRFAFACAV KVAITEAKHR LTLRIAEVIQ ENLDPAVRNS A
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