| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1575 |
|---|
| Symbol | |
|---|
| ID | 6877551 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | + |
|---|
| Start bp | 1539694 |
|---|
| End bp | 1540242 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642789439 |
|---|
| Product | CDP-alcohol phosphatidyltransferase |
|---|
| Protein accession | YP_002220004 |
|---|
| Protein GI | 198283683 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0558] Phosphatidylglycerophosphate synthase |
|---|
| TIGRFAM ID | [TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.691182 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.00268898 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTTC CGAACCTGTT GACCTTGCTG CGGCTCTTTC TGGTGCCTGT AATTTTCTAT
GCACTGGCGA GGGGATTTTT TGCCGTGGCA TTGGTCATTT TTTTCGCAGC GGCGATTACC
GACGCGTTGG ATGGCTGGAT AGCCCGCCAT TACCATCTCC AGACCCGTCT GGGTGCCGTT
CTCGACCCGG TGGCGGATAA ATTACTTGTA GTCACGACGG TTATCACGCT GACCTGGTTG
CAGCGCATTC CGTTGTGGCT GACAGTCGCC GTTATCTCCC GGGACCTGTT GATCGTCGGT
GGCGGTCTGC TCTACCTGCT GTTGATCGGA AAATTCAGTA TCCACCCGAC GCTGCTGTCG
AAATGGAACA CCGCGTTACA ATTCGTCGTC ATTGTGCTAG TGCTGTTAGA GGCGTCCAGC
CGCTGGCAGA TGCCGCTGCT GCCGGTTTTT ATCCTGGTAT TCGTTACGGC CGTTGCATCG
GGGGGGCAAT ATGTCTGGGT CTGGAGTCGC AAGGCCATTG CCCAGGACAG GGCTTCCGGC
CAATCATGA
|
|---|
| Protein sequence | MNLPNLLTLL RLFLVPVIFY ALARGFFAVA LVIFFAAAIT DALDGWIARH YHLQTRLGAV
LDPVADKLLV VTTVITLTWL QRIPLWLTVA VISRDLLIVG GGLLYLLLIG KFSIHPTLLS
KWNTALQFVV IVLVLLEASS RWQMPLLPVF ILVFVTAVAS GGQYVWVWSR KAIAQDRASG
QS
|
|---|
| |