| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1554 |
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| Symbol | |
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| ID | 6877529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 1514340 |
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| End bp | 1515431 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642789417 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002219983 |
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| Protein GI | 198283662 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0484603 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00000015248 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGAAAG CATTTGTCAT TGTCATTCTT GTATTGCTGA TCCTTTTCGG CGGTATTTTC
GGCTTCAAGC TCTACGGCAA CTATATGATG CACCAGGCCC TGGCGCATAT GCCCGTACCG
GTCGTCAGCG TCAGCGCCAG CAAGGTGGTA GAGCGGGAGT GGCACCCGGA AGTAACTGCC
GTGGGATCGT TTGCCGCCAT CCAGGGTGTG GAGGTGACGC CCCAGTTGGG CGGTGCCATT
ACCGGTATCT ATTTTCATTC CGGAGAATAC GTCAAGGCCG GTACCCCTCT GATCCAGATC
GACAACAGCA ACCAGTTGGC GCAACTGGCC AGCGACGAGG CTCAGCGGCG ATTGGCCCAG
ATCAATCTCC GCCGGACGCA GACGCTCATC GCCACCAAGG CCGCCAGCCA GTCTCAGCTC
GATTCCGCGG TGGCCAGCTA CCAAAGCGCG GTCGCCGCCG TAAAAAATGA CCACGCCACT
CTCGCAAAAC TCGCCATCCG CGCGCCCTTC AGCGGCTATC TCGGAGTTCG CCAGGTAGAC
CTGGGGCAAT ACATCATCCC CGGGACCGCC ATGGTGGATC TCCAGTCCTG GGATCCCCTC
TTTGTGAACT TTACGGTGCC TCAGAGTGAT TTCGCCCGCA TCCATGTAGG CACACCCGTT
CAGGTGGAGG TGGACAGTTA TCCCGGCCAG ACCTTCAGCG GCAAGATCAC CGCCATGGGG
GCGGCCATCA ATACCGCCAC GCGCCAGATT GACGTCCAGG CCACGGTGCC TAATCCAAAA
ACCATCCTGC GCCCGGGTAT GTTCGGGAAT GTCACGGTGA TCGAGAAAAG GCTGGAGAAA
GTGTTGACCG TACCGGCCAG CGCCATCACC TATAATACCT TCGGTGACTT TGTCTATGTG
GTGGAGAAAA AAACCATCCA TGGCAAGGAA AGCCAGATCG CCCTCCAGCG CATCGTCAAG
ACCGGTATCC AGCGAGGCAG CGAGGTACAG ATTCTGTCGG GGCTGCGTGC GGGAGAGCTG
GTGGTCACCG GGGGGCAGAT CAAGCTCCAC GAGGGTAGTC CTGTCAAAAT CCCCGCCAGC
GGCAAAGCCT GA
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| Protein sequence | MKKAFVIVIL VLLILFGGIF GFKLYGNYMM HQALAHMPVP VVSVSASKVV EREWHPEVTA
VGSFAAIQGV EVTPQLGGAI TGIYFHSGEY VKAGTPLIQI DNSNQLAQLA SDEAQRRLAQ
INLRRTQTLI ATKAASQSQL DSAVASYQSA VAAVKNDHAT LAKLAIRAPF SGYLGVRQVD
LGQYIIPGTA MVDLQSWDPL FVNFTVPQSD FARIHVGTPV QVEVDSYPGQ TFSGKITAMG
AAINTATRQI DVQATVPNPK TILRPGMFGN VTVIEKRLEK VLTVPASAIT YNTFGDFVYV
VEKKTIHGKE SQIALQRIVK TGIQRGSEVQ ILSGLRAGEL VVTGGQIKLH EGSPVKIPAS
GKA
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