| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1546 |
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| Symbol | |
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| ID | 6877521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 1499209 |
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| End bp | 1502271 |
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| Gene Length | 3063 bp |
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| Protein Length | 1020 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642789409 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_002219975 |
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| Protein GI | 198283654 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00297592 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTGCAGGG CTATTTTGCC TGAGTACGCC GAGCTCCACT GTCTCAGCGC ACTGAGTTTT
TTACGGGGTG CCAGTGCCGT GGAAGACCTG CTGGACCGTG CCCAGGCGCT GGGATACCGT
GCCCTCGCCA TTACCGAGGA GTGTTCCCTG GGCAGCGCGG CGCGAGCCCA CAGCCATGCC
TGCAATATCG GTTTTCCGCT GATACTGGGC AGTGAAATCG CCCTGACCGA TGGTCCGCGC
ATCGTCCTGC TGGTGCAGGA GCATGACGGT TATGTCGCGC TATCCCGCTT CATCACCCGC
GCCCGGGGGC GGGCGGGAAA AGGCCATTAT CAGGCCCGCA TGGCGGATTT GCCGGAACTT
GTGGGTTGTC TGGCCATCAT TCTCCCTGAT TCGCAAAGCC TGCGCTTCGA TGTTGCCGGC
GCCATCGCCG TAAGGGATTG TCTTGGCGCC GAAAATGTCT GGCTGGGCGC GGAGCTCCTG
CGTGGCGGCG ATGACGCGGC GCAACTTCGG GAGGTGTTGG AGCAGGGCAG GGCGCTGAAT
ATTCCTTGTC TGGCTTGCGG GGATGTCCAC ATGGACCGGC GCAGCCGTCG TTTTTTGCAG
GATGTGCTCA CTGCCATCCG CCTGCGGCGT CCGCTGGCAG ATCTGGGCTG GGCACTGGCC
CGTAATGGCG AGCGCCACCT GCGCCCGCGC TCCGTACTGG CGGAGATCTA TCCTCCGGAG
CTGCTGGTCG AAACCTTGCG GGTGGCAGAG CGCTGTCAAT TTTCTCTCGA TAGTCTCGTT
TATCGCTACC CCGATGGGGC CTGTCCCGCA GACCAGCAGC GAGATGATTA TCTCGCCGAA
CTGGCCAGGC AAGGTCTGCA ACGGCGTTAT CCCCAAGGTG TCGCCACGGT GGTAGCCACG
CAACTGGAGG CGGAACTGGC ACTGGTGCGG GAACTGGATT ACGCCGGCTA TTTCCTGACC
GTCCACGATA TCGTCCGATT TGCCAAGGGG CGCGGTATCC TCTGCCAGGG CCGGGGCTCG
GCGGCCAATT CGGTCATTTG CTATGCCCTC GGCATTACGG AAGTAGACCC CAGCCGAATG
CAACTGCTTT TCGCGCGATT CATTTCCCGC GATCGTCGGG AGCCGCCGGA TATTGACGTG
GATTTCGAGC ATGAGCGCCG CGAAGAAGTC ATTCAGTACG TGTTTCAGCA TTACGGGCGG
GACCACGCCG CGCTGACCGC TACCATCATC CATTATCGGC CGCGCAGTGC CATGCGCGAT
GCCGCCCGTG CCCTTGGTTT TGCGCCGGTC GAGATTCAGC GCCTCACCCA GGGCCTGGCT
TGGTGGGATG GACGCCAAAT TCGCCCGGAG CGTTTGCAGG AGCAGGGCTT CGACCCTACC
AGCCCGACCA TCCAACGCCT GGTCACCGTA GTCAATGCAC TGGTCGGTTT CCCGCGTCAT
CTCTCCCAGC ATGTCGGTGG CATGGTGCTC TCTGCGACCC CCCTCAATGC CTTAGTTCCC
ATCGAACCCG CCGCCATGGC GGAGCGCGCG GTGATTCAGT GGGACAAGGA CGATCTCGAC
GTCCTTGGTA TCCTCAAGGT CGATATACTC GCGCTGGGGA TGCTGAGCGT GTTGCGCCGT
GCCCTCGATG ATCTGGGCAT GACCCTCGCC GACATCCCTG CCGAAGACCC GGCCACCTAC
GCCATGCTCC AGCGCGGTGA GAGCCTGGGC GTCTTTCAGG TGGAGTCGCG GGCGCAGATG
AGTATGTTGC CGCGCCTCAA ACCCCGTTGT TTTTACGACC TGGTGATCGA AGTCGCCATC
ATCCGCCCCG GCCCTATCCA GGGCGATATG GTGCATCCCT ATCTGCGTCG CCGCCAGGGG
CTGGAGCCGG TGCGCTATCC TGGACCGGAA GTCAAAAAGG TGCTGGAACG GACCCTGGGT
GTGCCGATTT TTCAGGAGCA GGTGATGCAG ATTGCCATCG ATGCTGCGGG TTTCAGTGGT
GACGAGGCTG ATGGTCTGCG CCGGGCCATG GCCGCCTGGC GGCGCAAGGG GCATCTCGGC
CCTTACAGCG ACCGCCTCAT CCGCGGTCTC CGTCTGCGCG GCTATTCCGA AGCATTCGCC
CAGCGTCTTT GCCAGCAGAT TCAGGGCTTC GCCGAATATG GTTTTCCCGA ATCCCATGCC
GCAAGCTTCG CCCTGCTGGT TTATGCCTCC GCCTGGATCA AGTGCCACCA TCCGGCCATA
TTCGCCGCCG CGCTATTGAA CAGCCAGCCC ATGGGTTTTT ATGCCCCCGC CCAGATCGTG
CAGGAGGCCC GCCGCTGTGG CGTTGAGGTA TTGTCCGTGG ACATCTGCCA TAGTGACTGG
GATTGTAAGG TACAGGATGG GGCGCTGCGT CTGGGGCTTT GCCTGATCAA GGGCATGTCT
CCCAAAGAGG CGGAAAGGCT TCTGCACTGG CGGGCGCAGG GCGGTGCGCT GCACAGCGAG
GCGCTTCGCC ATGGCCTTGG TCTGTCCGCT GCCGCGCTGC ACCAACTGGC ATATGCCGGG
GCCCTGTCCA GCCTGCACGG GGACCGACAT CAGGCCCTGT GGGCGGTGCA GGGCAGCCTG
CCCCTGCCCA CCGCATTGCC CATGCCGGTG GTACCAGAGC AGGCTCCCGC CCTTCCTGCC
GAAACGTCCG CTGCCGCCTG TATTGCCGAT TATCAGCAAC TGGGCCTGAG CCTTGGTCCC
CATCCTCTGC ATTTTCTGCG CGAGCGGATC GCCCAAAGTG GCTATCGCCG TATCGCCGAG
GTGCGCCTGC AGCACCACGA CCGCCCGGAT CGTCTCGCCG GTCTGGTCAC CCACCGGCAG
CGTCCCGGTA CAGCCCATGG TACGGTATTC CTGACACTGG AAGATGAGTC CGGTATGATC
AATGTCATTG TCTGGCCGCA AAGGGTCGAA GGCTGGCGCC GGGCACTGCT GCAGGGCCGC
CTGCTGGGTA TCGGCGGTCG GCTGGAGCGC CAGGGTGTCA GTCTTCATTT TATCGCCGAC
GCCATGGAGG ATCTCAGCCC CTGGCTGGGT ACACTGAGCA CACGCTCCCG GGATTTTTAT
TAG
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| Protein sequence | MCRAILPEYA ELHCLSALSF LRGASAVEDL LDRAQALGYR ALAITEECSL GSAARAHSHA
CNIGFPLILG SEIALTDGPR IVLLVQEHDG YVALSRFITR ARGRAGKGHY QARMADLPEL
VGCLAIILPD SQSLRFDVAG AIAVRDCLGA ENVWLGAELL RGGDDAAQLR EVLEQGRALN
IPCLACGDVH MDRRSRRFLQ DVLTAIRLRR PLADLGWALA RNGERHLRPR SVLAEIYPPE
LLVETLRVAE RCQFSLDSLV YRYPDGACPA DQQRDDYLAE LARQGLQRRY PQGVATVVAT
QLEAELALVR ELDYAGYFLT VHDIVRFAKG RGILCQGRGS AANSVICYAL GITEVDPSRM
QLLFARFISR DRREPPDIDV DFEHERREEV IQYVFQHYGR DHAALTATII HYRPRSAMRD
AARALGFAPV EIQRLTQGLA WWDGRQIRPE RLQEQGFDPT SPTIQRLVTV VNALVGFPRH
LSQHVGGMVL SATPLNALVP IEPAAMAERA VIQWDKDDLD VLGILKVDIL ALGMLSVLRR
ALDDLGMTLA DIPAEDPATY AMLQRGESLG VFQVESRAQM SMLPRLKPRC FYDLVIEVAI
IRPGPIQGDM VHPYLRRRQG LEPVRYPGPE VKKVLERTLG VPIFQEQVMQ IAIDAAGFSG
DEADGLRRAM AAWRRKGHLG PYSDRLIRGL RLRGYSEAFA QRLCQQIQGF AEYGFPESHA
ASFALLVYAS AWIKCHHPAI FAAALLNSQP MGFYAPAQIV QEARRCGVEV LSVDICHSDW
DCKVQDGALR LGLCLIKGMS PKEAERLLHW RAQGGALHSE ALRHGLGLSA AALHQLAYAG
ALSSLHGDRH QALWAVQGSL PLPTALPMPV VPEQAPALPA ETSAAACIAD YQQLGLSLGP
HPLHFLRERI AQSGYRRIAE VRLQHHDRPD RLAGLVTHRQ RPGTAHGTVF LTLEDESGMI
NVIVWPQRVE GWRRALLQGR LLGIGGRLER QGVSLHFIAD AMEDLSPWLG TLSTRSRDFY
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