Gene Lferr_1541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1541 
Symbol 
ID6877516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1495441 
End bp1495938 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content59% 
IMG OID642789404 
Producthypothetical protein 
Protein accessionYP_002219970 
Protein GI198283649 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00747013 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCTGATT TGAAAATATC TCCATTGGTC ATTTTCACCG TGGGTACCGC GGCCTCTGGT 
AAAAGCACCT GGGCGCGATC GGTGCAGTCC CGTTATACGG GATTGCGTAT CGCCGTCATC
GAAAGAGACG AGATCCGGGT TTCCCTGCAC GAGGGGAGGA TCGAGGGGGT TTTTTCCTGG
CTGGCGTGGA ATCCTGCCCT GGAAGGCAAG GTCCAGCGGC TTTGGGAACA GCGGGTGCGG
GGTGCCATCG GTACGCACGA TGTCCTTGTC CTTGCCGACA CCCATCTGGA TGTCGGCGAT
CTGGCAAAAA AAGCACAATG GTTGCGGGAT CAGGGAGTCA CGGAGATGTC TGTGCATTAC
TTCCCGGCCT TGCCGCTGAT GGAGCTCATC CGCCGCGATC GGGGAAGGGG CCACCCGGTG
GGTGGCGAAG TGCTCAGGGA GCACATCAAA AAGCTGGAGC CGGAGGACCG CTACTGGGAG
GCTGTGGATG GCCTTTAA
 
Protein sequence
MPDLKISPLV IFTVGTAASG KSTWARSVQS RYTGLRIAVI ERDEIRVSLH EGRIEGVFSW 
LAWNPALEGK VQRLWEQRVR GAIGTHDVLV LADTHLDVGD LAKKAQWLRD QGVTEMSVHY
FPALPLMELI RRDRGRGHPV GGEVLREHIK KLEPEDRYWE AVDGL