Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1541 |
Symbol | |
ID | 6877516 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 1495441 |
End bp | 1495938 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642789404 |
Product | hypothetical protein |
Protein accession | YP_002219970 |
Protein GI | 198283649 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00747013 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCCTGATT TGAAAATATC TCCATTGGTC ATTTTCACCG TGGGTACCGC GGCCTCTGGT AAAAGCACCT GGGCGCGATC GGTGCAGTCC CGTTATACGG GATTGCGTAT CGCCGTCATC GAAAGAGACG AGATCCGGGT TTCCCTGCAC GAGGGGAGGA TCGAGGGGGT TTTTTCCTGG CTGGCGTGGA ATCCTGCCCT GGAAGGCAAG GTCCAGCGGC TTTGGGAACA GCGGGTGCGG GGTGCCATCG GTACGCACGA TGTCCTTGTC CTTGCCGACA CCCATCTGGA TGTCGGCGAT CTGGCAAAAA AAGCACAATG GTTGCGGGAT CAGGGAGTCA CGGAGATGTC TGTGCATTAC TTCCCGGCCT TGCCGCTGAT GGAGCTCATC CGCCGCGATC GGGGAAGGGG CCACCCGGTG GGTGGCGAAG TGCTCAGGGA GCACATCAAA AAGCTGGAGC CGGAGGACCG CTACTGGGAG GCTGTGGATG GCCTTTAA
|
Protein sequence | MPDLKISPLV IFTVGTAASG KSTWARSVQS RYTGLRIAVI ERDEIRVSLH EGRIEGVFSW LAWNPALEGK VQRLWEQRVR GAIGTHDVLV LADTHLDVGD LAKKAQWLRD QGVTEMSVHY FPALPLMELI RRDRGRGHPV GGEVLREHIK KLEPEDRYWE AVDGL
|
| |