Gene Lferr_1536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1536 
Symbol 
ID6877511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1492317 
End bp1492859 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content63% 
IMG OID642789399 
Producthypothetical protein 
Protein accessionYP_002219965 
Protein GI198283644 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.438735 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0276141 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCAG CGAGCAAAGC CCCCAGCGCC ACCTGGCGCC ATCCGGTCTG GTCCACCGCC 
CAAAAAGCCC TCGTCGGCAC CGCCCCCGGC CCGGCCCGGC TCTGGTTCAC CGTCGGCAAG
GGCATTGTCA CGGAGGTCTT TTATCCGCGC ATCGACGTCC CCCAGGTCCG GGACATGGGT
TTGATCATTG CCGATGGCAA GGGTTTCTGG CAGGAGCTCA AGGCCTTGCC CGAGCCGCAA
TTGCAGATCG ACGATCCGGT CGTCCCTTTA CCCGCCATCA CCCACTGGCG CTTCCGGCAA
ATGCCCACCG GCAATGAGTT GCGTTTCCTG CTCTCGGCAC CCTTTACGGT GCATCGGGGA
GTCGATGGCT GGCAAGACCC CACGGACACC CTGTCGGAAG ATTGGGATCT CGGCCATGTC
GCTATTTTGC CCACGCAGAC AATGGCTGCC GGAACCACGC TCCACTTCCC CTTCTACTGG
CGGGATACCG GCCAGTGGCA GGGCGAGGAC TTCAGCATCA CCCTGCAAGG AGAAAACGCA
TGA
 
Protein sequence
MEAASKAPSA TWRHPVWSTA QKALVGTAPG PARLWFTVGK GIVTEVFYPR IDVPQVRDMG 
LIIADGKGFW QELKALPEPQ LQIDDPVVPL PAITHWRFRQ MPTGNELRFL LSAPFTVHRG
VDGWQDPTDT LSEDWDLGHV AILPTQTMAA GTTLHFPFYW RDTGQWQGED FSITLQGENA