Gene Lferr_1529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1529 
Symbol 
ID6877504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand- 
Start bp1486256 
End bp1486900 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content48% 
IMG OID642789392 
Productglycosyl transferase family 2 
Protein accessionYP_002219958 
Protein GI198283637 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.322486 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0695414 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGACA ATAAATCACC GGTTTTCATG GTGTTAGTGC CCGTATTTAA CCGTATGAAC 
CTATTGGAAA GGGCTATTGG TTCTCTCTAT CGGCAGACTT TTCAGGATTT CTGTTTGGTG 
GTGATAGATG ATGGCAGCAC CGATAACAGT CTGCAACGCG CGATGGATCT CACCAAAAAA 
ATGATACATC CATCGGGTTT GATCCGGCTG CCTGAAAATG TCGGTGTTGG AACTGCGCTG 
AATATCGGGG CGGAGGTGGG CCGCAGTAAA AGCATTCCTT GGATAACGCG GCTGGACTCC 
GATGACGTGT ATGCATCGGA TTATCTGGAA AACCGGCTAC GGGTGATCCG TACGTATCCG 
GAGGTGGATT TGTTCCATGG TGGAATCCGG GTCATCAATG GCCCTGAGAC GGTTCCTGAC 
GCAAGAAATA AGAAACGGCG CATTGCCATA TCAGAAACCT CCCAAGGGGC GACTATAGTG 
GTTAAGTCTG AAGTTTTTAA GCGATTGGGG TGCTTTGATG ACCTGCGCTA CGGGGAAGAT 
TATGCCTTTC TGGAAAAAGC CCGTATGGCA GGATGCTCAA TCCGTAAGTT GGATTTCGGA 
GACTATTATT ATTACCGAGA TACGCTGAAT GCACTAACCT GTTAG
 
Protein sequence
MLDNKSPVFM VLVPVFNRMN LLERAIGSLY RQTFQDFCLV VIDDGSTDNS LQRAMDLTKK 
MIHPSGLIRL PENVGVGTAL NIGAEVGRSK SIPWITRLDS DDVYASDYLE NRLRVIRTYP 
EVDLFHGGIR VINGPETVPD ARNKKRRIAI SETSQGATIV VKSEVFKRLG CFDDLRYGED 
YAFLEKARMA GCSIRKLDFG DYYYYRDTLN ALTC