| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1508 |
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| Symbol | |
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| ID | 6877483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 1468320 |
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| End bp | 1469270 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642789377 |
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| Product | RNA polymerase, sigma 70 subunit, RpoD family |
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| Protein accession | YP_002219943 |
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| Protein GI | 198283622 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGACAG AGGATGCCGA CGGGGACGTT CCAGACGCCC TTGAAGAAAT AGCCGAGGTT
GGACAGGACG AAGCCTGCCT CTGGCCCGAA ACGCCGGAAT TCGACGCCAT AGCCGACCCT
GCCTGGGAAG CCGGGGCGTC CGATCATTTT GACGCCATAA AGCTCTATCT GCAGGAAATC
GGCCATAACC CCCTGCTCAC GGCGGAGGAG GAGGTCTCCC TGGGTCTCAG CGCACAACAG
GGGGATATTA CGGCTCGCAA TCGCCTGGTG GAATGCAACC TCCGTCTCGT CGTCCGCATT
GCGCGCCGCT ACCAACGGCA GCACACCCTT CCGCTCCTCG ATCTCATCGA AGAGGGGAAT
CTCGGATTGA TCCGTGCGGC GGAATTATTT GATCCGACGC GGGGATTTCG GTTTTCCACC
TATGCCACCT GGTGGATTCG CCAGAATATA GACCGAGGCA TCATGCAGCA GTCGCGAGTG
GTACGGTTGC CTACCCATAT CATCAAAAAT CTCAGCGCGG TGCTGCGCAG TTCCCGGCAG
ATCGCACAAA CGATGCAGGG CGACCCTCGC GTAGAAGACG TGGCGCAGGT CATGGGCAAG
TCCGTCGCCT ATGTGGAGGA CTGTCTCCAG CAGGACCGCC GTGTGGTCAG TCTGGATGCG
CCCTCCCGAT GGGAGGGTAG CCCATCTTTG GCGCAAACGT TGGTGGATGC CGATCAGGCG
GACCTGGGGG CTTCTCTTGA AGAACAGGAC CTCCAGAGGC AGATTCACCG AGCCCTCCTG
GGTCTGGACG TGCGACATCG TACGATCCTG ATCCGTCGTT TCGGCATAGA CGGTCAGGAC
GGGGCGTCCC TTTCCGCTAT CGGCAAAGAG TTGGGCGTAA GCCACGAACG GGTCAGACAG
CTACAGGAGG AGGCATTGGA TCTGCTGCGC CAGCATACGG AGTTACAGTA A
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| Protein sequence | MLTEDADGDV PDALEEIAEV GQDEACLWPE TPEFDAIADP AWEAGASDHF DAIKLYLQEI
GHNPLLTAEE EVSLGLSAQQ GDITARNRLV ECNLRLVVRI ARRYQRQHTL PLLDLIEEGN
LGLIRAAELF DPTRGFRFST YATWWIRQNI DRGIMQQSRV VRLPTHIIKN LSAVLRSSRQ
IAQTMQGDPR VEDVAQVMGK SVAYVEDCLQ QDRRVVSLDA PSRWEGSPSL AQTLVDADQA
DLGASLEEQD LQRQIHRALL GLDVRHRTIL IRRFGIDGQD GASLSAIGKE LGVSHERVRQ
LQEEALDLLR QHTELQ
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