Gene Lferr_1505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1505 
Symbol 
ID6877480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1466261 
End bp1466914 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content53% 
IMG OID642789374 
Producttoluene tolerance family protein 
Protein accessionYP_002219940 
Protein GI198283619 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2854] ABC-type transport system involved in resistance to organic solvents, auxiliary component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.939447 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGCA AAGACATCGC AACACTGTAT CGTTTCAGAG TGTTCAACAG TATCTGGAGC 
GCATGTTTCC TGCTCCTGTG GAGCACAGCA GTCTGGGCGG CGGTACCGGA TACGCCCACT
ATCATGGTCC GGGACATCAC CCAGGAGGTC ATCCGCGTAT TGCAGACGCA TGAGGGAAAA
CCCTTCACAC CCGCCGTCCA GCAACAGATC GCGGATATTG TGCTGCCCCA CATCGATTTC
ATGACCATGT CGCGCTTCGT CATGAGTCAA TACTGGAGCC AGATGACGCC GGCACAGCAG
GATGAATTCG TCCAGCTTTT CAAGGAGCAA CTGGTTCATA CCTACATGAT TGCATTCAGT
CATTACTCCG GCCAGACGGT ACAGATCCTT AGCAGTCGCC AGATATATCG ACATCCTGAC
ATCGTGCAGG TGAATACGAA GATTCGGCAA ACGAACGGGC TGGCGAACAT TCCGGTCACC
TATGCGTTCC TCCAGGAACG TTCCGGCTGG AAGATTTACG ATGTATTCAT CGACGGGGTT
TGCATGAACC TGACTTACCG GAATACGTAC GGGCAAACAG TGGCCCATAA AGGAATCGCC
AGTTTTCTCC AGGATCTGAG CAAAAAGGAG CGGCCCTGGA ATAAGGGCCA GTGA
 
Protein sequence
MNGKDIATLY RFRVFNSIWS ACFLLLWSTA VWAAVPDTPT IMVRDITQEV IRVLQTHEGK 
PFTPAVQQQI ADIVLPHIDF MTMSRFVMSQ YWSQMTPAQQ DEFVQLFKEQ LVHTYMIAFS
HYSGQTVQIL SSRQIYRHPD IVQVNTKIRQ TNGLANIPVT YAFLQERSGW KIYDVFIDGV
CMNLTYRNTY GQTVAHKGIA SFLQDLSKKE RPWNKGQ