| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1504 |
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| Symbol | |
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| ID | 6877478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 1464934 |
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| End bp | 1465500 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642789372 |
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| Product | NLP/P60 protein |
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| Protein accession | YP_002219939 |
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| Protein GI | 198283618 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0399794 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGAAAGC AACACGTTAT GTCACCTGTG GGTTCCGTGA AGCGTGGGGG CGGACTTCTG
CTATTGCTGA CCATGACCCT CAGCGGCTGT GCCACCATGA CGCCGCCGCC AGCAGTCCGA
TCTTCCGATA ACGCATCATC CGCTTACGAC AATCGCGCGG AAACCACCAT ACTCGATGCC
GTGCTCGTGC ATACGATCGC AGAAATTGGC AAGCCCTATC AATGGGGTGG AGACAACCCT
CGGACGGGAT TCGATTGCAG CGGGTTCATT CAGTATGTAT TACGTCGCGC CGGCGTAAAC
ATTCCCCGAA CCTCTTTTGC CCAGGCGGCC GCCTTGCCTT CGGTAAACCC CAGGCGCATT
CGTCCTGGTG ATCTGGTATT TTTCAACACC ATGGGCCAGC CCTTCTCCCA TGTCGGCATC
TATATCGGCG GCGACCAGTT CGTCAGCGCC CTGAACCCCC GCCAGGGTGT GGCGGTACAA
AGCTTGCGAA TTCCTTACTG GGCGGAGCGT CTGGATGGTG TGCGGCGTCC CATGCCCCCT
GAACTGCTGG CGATGCGGGC CCCTTGA
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| Protein sequence | MRKQHVMSPV GSVKRGGGLL LLLTMTLSGC ATMTPPPAVR SSDNASSAYD NRAETTILDA
VLVHTIAEIG KPYQWGGDNP RTGFDCSGFI QYVLRRAGVN IPRTSFAQAA ALPSVNPRRI
RPGDLVFFNT MGQPFSHVGI YIGGDQFVSA LNPRQGVAVQ SLRIPYWAER LDGVRRPMPP
ELLAMRAP
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