Gene Lferr_1501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1501 
Symbol 
ID6877475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1461602 
End bp1462309 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content61% 
IMG OID642789369 
Productubiquinone biosynthesis O-methyltransferase 
Protein accessionYP_002219936 
Protein GI198283615 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID[TIGR01983] ubiquinone biosynthesis O-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.209044 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAGTG ATCAGGCTGA AGTGAACAAA TTCGACGCCC TCTCCGGTCA GTGGTGGGAT 
ACCGATGGGC CATTTCGTAC CCTGCATGAA ATCAACCCGT TGCGCCTGGA TTTTATCGCC
AGAGGCTGTG GCGGGCTGGC GGGCAAAAAG GTGCTGGACG TGGGTACCGG GGGCGGGCTC
CTCGCCGAAG CCATGGCGCG TCAGGGGGCG GAGGTTACCG GGATCGATCT CGCGGAGGAC
GGCCTGGACG TGGCGCGCGC CCATGCGGAT GCCAACCATC TCCACATCGA CTACCGGCAG
ATCGCCGTCG AGGATCTGGC CACGGAAAAA CCGGAGTATT ACGACGTGGT GACCTGCATG
GAAATGCTGG AGCATGTGCC GGATCCTGCC GCCGTGGTGG ATGCCTGCGC CCGCCTGCTC
CATCCCGGCG GAGATGCCTT TTTTGCCACC CTCAATCGCG GCCCCAAAAG CTATCTGATG
GCTATAGTCG GAGCCGAATA CGTGCTTGGA CTGCTCCCCC GCGGAACCCA CGACTATCGG
AAGTTCATCC GGCCCAGCGA GTTGCTGGCC ATGACCCACC AAAGTCATCT GCAGACCATG
GCCCTCAAGG GCATGCACTT TGACCCGATC CGCCACCGCG GGCGTCTGAG CGATGATGTC
AGCATCAACT ACCTGAGTCA GGCGCGCAAA GCAGCACCTA ATGTCTGA
 
Protein sequence
MNSDQAEVNK FDALSGQWWD TDGPFRTLHE INPLRLDFIA RGCGGLAGKK VLDVGTGGGL 
LAEAMARQGA EVTGIDLAED GLDVARAHAD ANHLHIDYRQ IAVEDLATEK PEYYDVVTCM
EMLEHVPDPA AVVDACARLL HPGGDAFFAT LNRGPKSYLM AIVGAEYVLG LLPRGTHDYR
KFIRPSELLA MTHQSHLQTM ALKGMHFDPI RHRGRLSDDV SINYLSQARK AAPNV